Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC41.73■■■■■ 4.27
CCNB3Q8WWL7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC41.72■■■■■ 4.27
CCNB3Q8WWL7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC41.72■■■■■ 4.27
CCNB3Q8WWL7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC41.72■■■■■ 4.27
CCNB3Q8WWL7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC41.72■■■■■ 4.27
CCNB3Q8WWL7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC41.68■■■■■ 4.26
CCNB3Q8WWL7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC41.65■■■■■ 4.26
CCNB3Q8WWL7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC41.65■■■■■ 4.26
CCNB3Q8WWL7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC41.63■■■■■ 4.25
CCNB3Q8WWL7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC41.62■■■■■ 4.25
CCNB3Q8WWL7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC41.62■■■■■ 4.25
CCNB3Q8WWL7 DUX4L29-201ENST00000425409 679 ntBASIC41.61■■■■■ 4.25
CCNB3Q8WWL7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC41.61■■■■■ 4.25
CCNB3Q8WWL7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC41.6■■■■■ 4.25
CCNB3Q8WWL7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC41.6■■■■■ 4.25
CCNB3Q8WWL7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC41.59■■■■■ 4.25
CCNB3Q8WWL7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC41.59■■■■■ 4.25
CCNB3Q8WWL7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC41.57■■■■■ 4.25
CCNB3Q8WWL7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC41.57■■■■■ 4.25
CCNB3Q8WWL7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC41.57■■■■■ 4.24
CCNB3Q8WWL7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC41.55■■■■■ 4.24
CCNB3Q8WWL7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC41.54■■■■■ 4.24
CCNB3Q8WWL7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC41.54■■■■■ 4.24
CCNB3Q8WWL7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC41.54■■■■■ 4.24
CCNB3Q8WWL7 AC021231.2-201ENST00000594613 730 ntBASIC41.53■■■■■ 4.24
CCNB3Q8WWL7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC41.53■■■■■ 4.24
CCNB3Q8WWL7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC41.51■■■■■ 4.24
CCNB3Q8WWL7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC41.51■■■■■ 4.24
CCNB3Q8WWL7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC41.5■■■■■ 4.23
CCNB3Q8WWL7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC41.5■■■■■ 4.23
CCNB3Q8WWL7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC41.5■■■■■ 4.23
CCNB3Q8WWL7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC41.49■■■■■ 4.23
CCNB3Q8WWL7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC41.49■■■■■ 4.23
CCNB3Q8WWL7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC41.49■■■■■ 4.23
CCNB3Q8WWL7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC41.48■■■■■ 4.23
CCNB3Q8WWL7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC41.48■■■■■ 4.23
CCNB3Q8WWL7 MIR6090-201ENST00000622481 60 ntBASIC41.47■■■■■ 4.23
CCNB3Q8WWL7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC41.47■■■■■ 4.23
CCNB3Q8WWL7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC41.47■■■■■ 4.23
CCNB3Q8WWL7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC41.45■■■■■ 4.23
CCNB3Q8WWL7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC41.44■■■■■ 4.22
CCNB3Q8WWL7 AC108673.1-201ENST00000510422 1159 ntBASIC41.44■■■■■ 4.22
CCNB3Q8WWL7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC41.44■■■■■ 4.22
CCNB3Q8WWL7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC41.44■■■■■ 4.22
CCNB3Q8WWL7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC41.43■■■■■ 4.22
CCNB3Q8WWL7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC41.42■■■■■ 4.22
CCNB3Q8WWL7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC41.42■■■■■ 4.22
CCNB3Q8WWL7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC41.41■■■■■ 4.22
CCNB3Q8WWL7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC41.41■■■■■ 4.22
CCNB3Q8WWL7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC41.4■■■■■ 4.22
CCNB3Q8WWL7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC41.38■■■■■ 4.22
CCNB3Q8WWL7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC41.38■■■■■ 4.22
CCNB3Q8WWL7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC41.38■■■■■ 4.21
CCNB3Q8WWL7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC41.37■■■■■ 4.21
CCNB3Q8WWL7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC41.37■■■■■ 4.21
CCNB3Q8WWL7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC41.37■■■■■ 4.21
CCNB3Q8WWL7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC41.37■■■■■ 4.21
CCNB3Q8WWL7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC41.36■■■■■ 4.21
CCNB3Q8WWL7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC41.36■■■■■ 4.21
CCNB3Q8WWL7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC41.36■■■■■ 4.21
CCNB3Q8WWL7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC41.34■■■■■ 4.21
CCNB3Q8WWL7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC41.34■■■■■ 4.21
CCNB3Q8WWL7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC41.32■■■■■ 4.21
CCNB3Q8WWL7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC41.32■■■■■ 4.21
CCNB3Q8WWL7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC41.31■■■■■ 4.2
CCNB3Q8WWL7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC41.31■■■■■ 4.2
CCNB3Q8WWL7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC41.3■■■■■ 4.2
CCNB3Q8WWL7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC41.3■■■■■ 4.2
CCNB3Q8WWL7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC41.3■■■■■ 4.2
CCNB3Q8WWL7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC41.3■■■■■ 4.2
CCNB3Q8WWL7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC41.29■■■■■ 4.2
CCNB3Q8WWL7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC41.26■■■■■ 4.2
CCNB3Q8WWL7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC41.25■■■■■ 4.19
CCNB3Q8WWL7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC41.24■■■■■ 4.19
CCNB3Q8WWL7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC41.24■■■■■ 4.19
CCNB3Q8WWL7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC41.23■■■■■ 4.19
CCNB3Q8WWL7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC41.22■■■■■ 4.19
CCNB3Q8WWL7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC41.21■■■■■ 4.19
CCNB3Q8WWL7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC41.21■■■■■ 4.19
CCNB3Q8WWL7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC41.18■■■■■ 4.18
CCNB3Q8WWL7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC41.18■■■■■ 4.18
CCNB3Q8WWL7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC41.18■■■■■ 4.18
CCNB3Q8WWL7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC41.17■■■■■ 4.18
CCNB3Q8WWL7 MIR4449-201ENST00000578365 66 ntBASIC41.16■■■■■ 4.18
CCNB3Q8WWL7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC41.16■■■■■ 4.18
CCNB3Q8WWL7 MIR639-201ENST00000384974 98 ntBASIC41.14■■■■■ 4.18
CCNB3Q8WWL7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC41.14■■■■■ 4.18
CCNB3Q8WWL7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC41.14■■■■■ 4.18
CCNB3Q8WWL7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC41.13■■■■■ 4.18
CCNB3Q8WWL7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC41.13■■■■■ 4.17
CCNB3Q8WWL7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC41.12■■■■■ 4.17
CCNB3Q8WWL7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC41.11■■■■■ 4.17
CCNB3Q8WWL7 LINC01971-201ENST00000617888 1048 ntBASIC41.11■■■■■ 4.17
CCNB3Q8WWL7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC41.11■■■■■ 4.17
CCNB3Q8WWL7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC41.1■■■■■ 4.17
CCNB3Q8WWL7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC41.1■■■■■ 4.17
CCNB3Q8WWL7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC41.09■■■■■ 4.17
CCNB3Q8WWL7 MIR3648-2-201ENST00000581792 180 ntBASIC41.09■■■■■ 4.17
CCNB3Q8WWL7 MIR3648-1-201ENST00000615959 180 ntBASIC41.09■■■■■ 4.17
CCNB3Q8WWL7 AC016575.1-201ENST00000607026 382 ntBASIC41.06■■■■■ 4.16
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms