Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
U2AF1L4Q8WU68 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
U2AF1L4Q8WU68 CR559946.2-201ENST00000623684 991 ntBASIC30.73■■■□□ 2.51
U2AF1L4Q8WU68 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.72■■■□□ 2.51
U2AF1L4Q8WU68 DUX4L11-201ENST00000611504 1267 ntBASIC30.71■■■□□ 2.51
U2AF1L4Q8WU68 DUX4L12-201ENST00000614593 1267 ntBASIC30.71■■■□□ 2.51
U2AF1L4Q8WU68 DUX4L14-201ENST00000621227 1267 ntBASIC30.71■■■□□ 2.51
U2AF1L4Q8WU68 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
U2AF1L4Q8WU68 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
U2AF1L4Q8WU68 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
U2AF1L4Q8WU68 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.67■■■□□ 2.5
U2AF1L4Q8WU68 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
U2AF1L4Q8WU68 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
U2AF1L4Q8WU68 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
U2AF1L4Q8WU68 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
U2AF1L4Q8WU68 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
U2AF1L4Q8WU68 LINC01971-201ENST00000617888 1048 ntBASIC30.65■■■□□ 2.5
U2AF1L4Q8WU68 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.65■■■□□ 2.5
U2AF1L4Q8WU68 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
U2AF1L4Q8WU68 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
U2AF1L4Q8WU68 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
U2AF1L4Q8WU68 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.63■■■□□ 2.49
U2AF1L4Q8WU68 MIR6090-201ENST00000622481 60 ntBASIC30.63■■■□□ 2.49
U2AF1L4Q8WU68 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
U2AF1L4Q8WU68 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
U2AF1L4Q8WU68 AC108673.1-201ENST00000510422 1159 ntBASIC30.62■■■□□ 2.49
U2AF1L4Q8WU68 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
U2AF1L4Q8WU68 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.62■■■□□ 2.49
U2AF1L4Q8WU68 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
U2AF1L4Q8WU68 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
U2AF1L4Q8WU68 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
U2AF1L4Q8WU68 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.59■■■□□ 2.49
U2AF1L4Q8WU68 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.59■■■□□ 2.49
U2AF1L4Q8WU68 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
U2AF1L4Q8WU68 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
U2AF1L4Q8WU68 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
U2AF1L4Q8WU68 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
U2AF1L4Q8WU68 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
U2AF1L4Q8WU68 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.56■■■□□ 2.48
U2AF1L4Q8WU68 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
U2AF1L4Q8WU68 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
U2AF1L4Q8WU68 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.54■■■□□ 2.48
U2AF1L4Q8WU68 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.53■■■□□ 2.48
U2AF1L4Q8WU68 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
U2AF1L4Q8WU68 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
U2AF1L4Q8WU68 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
U2AF1L4Q8WU68 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
U2AF1L4Q8WU68 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
U2AF1L4Q8WU68 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
U2AF1L4Q8WU68 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
U2AF1L4Q8WU68 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
U2AF1L4Q8WU68 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
U2AF1L4Q8WU68 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.49■■■□□ 2.47
U2AF1L4Q8WU68 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
U2AF1L4Q8WU68 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.48■■■□□ 2.47
U2AF1L4Q8WU68 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.48■■■□□ 2.47
U2AF1L4Q8WU68 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.46■■■□□ 2.47
U2AF1L4Q8WU68 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
U2AF1L4Q8WU68 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
U2AF1L4Q8WU68 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.45■■■□□ 2.47
U2AF1L4Q8WU68 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.45■■■□□ 2.46
U2AF1L4Q8WU68 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
U2AF1L4Q8WU68 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.44■■■□□ 2.46
U2AF1L4Q8WU68 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
U2AF1L4Q8WU68 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.43■■■□□ 2.46
U2AF1L4Q8WU68 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
U2AF1L4Q8WU68 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
U2AF1L4Q8WU68 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
U2AF1L4Q8WU68 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
U2AF1L4Q8WU68 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.4■■■□□ 2.46
U2AF1L4Q8WU68 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
U2AF1L4Q8WU68 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.39■■■□□ 2.46
U2AF1L4Q8WU68 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.39■■■□□ 2.46
U2AF1L4Q8WU68 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
U2AF1L4Q8WU68 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
U2AF1L4Q8WU68 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.37■■■□□ 2.45
U2AF1L4Q8WU68 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
U2AF1L4Q8WU68 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.36■■■□□ 2.45
U2AF1L4Q8WU68 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
U2AF1L4Q8WU68 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.36■■■□□ 2.45
U2AF1L4Q8WU68 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.35■■■□□ 2.45
U2AF1L4Q8WU68 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
U2AF1L4Q8WU68 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.34■■■□□ 2.45
U2AF1L4Q8WU68 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.34■■■□□ 2.45
U2AF1L4Q8WU68 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
U2AF1L4Q8WU68 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.32■■■□□ 2.44
U2AF1L4Q8WU68 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
U2AF1L4Q8WU68 RARRES2P2-201ENST00000394842 485 ntBASIC30.31■■■□□ 2.44
U2AF1L4Q8WU68 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
U2AF1L4Q8WU68 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
U2AF1L4Q8WU68 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
U2AF1L4Q8WU68 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
U2AF1L4Q8WU68 ABHD17AP5-201ENST00000580133 923 ntBASIC30.28■■■□□ 2.44
U2AF1L4Q8WU68 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.28■■■□□ 2.44
U2AF1L4Q8WU68 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
U2AF1L4Q8WU68 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.44
U2AF1L4Q8WU68 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.26■■■□□ 2.43
U2AF1L4Q8WU68 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
U2AF1L4Q8WU68 DUX4L13-201ENST00000554103 1267 ntBASIC30.26■■■□□ 2.43
U2AF1L4Q8WU68 DUX4L15-201ENST00000611059 1267 ntBASIC30.26■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms