Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPTSSBQ8NFR3 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SPTSSBQ8NFR3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPTSSBQ8NFR3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPTSSBQ8NFR3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPTSSBQ8NFR3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SPTSSBQ8NFR3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SPTSSBQ8NFR3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC14.85□□□□□ -0.03
SPTSSBQ8NFR3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPTSSBQ8NFR3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPTSSBQ8NFR3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPTSSBQ8NFR3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPTSSBQ8NFR3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPTSSBQ8NFR3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPTSSBQ8NFR3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.84□□□□□ -0.03
SPTSSBQ8NFR3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPTSSBQ8NFR3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SPTSSBQ8NFR3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPTSSBQ8NFR3 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SPTSSBQ8NFR3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPTSSBQ8NFR3 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPTSSBQ8NFR3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPTSSBQ8NFR3 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPTSSBQ8NFR3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
SPTSSBQ8NFR3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC14.81□□□□□ -0.04
SPTSSBQ8NFR3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPTSSBQ8NFR3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPTSSBQ8NFR3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPTSSBQ8NFR3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPTSSBQ8NFR3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPTSSBQ8NFR3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
SPTSSBQ8NFR3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SPTSSBQ8NFR3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTSSBQ8NFR3 AC138932.1-201ENST00000534164 6830 ntBASIC14.78□□□□□ -0.04
SPTSSBQ8NFR3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTSSBQ8NFR3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPTSSBQ8NFR3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPTSSBQ8NFR3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
SPTSSBQ8NFR3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SPTSSBQ8NFR3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPTSSBQ8NFR3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC14.76□□□□□ -0.05
SPTSSBQ8NFR3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPTSSBQ8NFR3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC14.76□□□□□ -0.05
SPTSSBQ8NFR3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPTSSBQ8NFR3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPTSSBQ8NFR3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPTSSBQ8NFR3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPTSSBQ8NFR3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SPTSSBQ8NFR3 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SPTSSBQ8NFR3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SPTSSBQ8NFR3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPTSSBQ8NFR3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPTSSBQ8NFR3 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC14.75□□□□□ -0.05
SPTSSBQ8NFR3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPTSSBQ8NFR3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPTSSBQ8NFR3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPTSSBQ8NFR3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPTSSBQ8NFR3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPTSSBQ8NFR3 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPTSSBQ8NFR3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SPTSSBQ8NFR3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPTSSBQ8NFR3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC14.72□□□□□ -0.05
SPTSSBQ8NFR3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPTSSBQ8NFR3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SPTSSBQ8NFR3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC14.71□□□□□ -0.05
SPTSSBQ8NFR3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SPTSSBQ8NFR3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC14.71□□□□□ -0.05
SPTSSBQ8NFR3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SPTSSBQ8NFR3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SPTSSBQ8NFR3 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SPTSSBQ8NFR3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPTSSBQ8NFR3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SPTSSBQ8NFR3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPTSSBQ8NFR3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
SPTSSBQ8NFR3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SPTSSBQ8NFR3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPTSSBQ8NFR3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPTSSBQ8NFR3 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPTSSBQ8NFR3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPTSSBQ8NFR3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPTSSBQ8NFR3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC14.68□□□□□ -0.06
SPTSSBQ8NFR3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SPTSSBQ8NFR3 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPTSSBQ8NFR3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC14.67□□□□□ -0.06
SPTSSBQ8NFR3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPTSSBQ8NFR3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SPTSSBQ8NFR3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
SPTSSBQ8NFR3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPTSSBQ8NFR3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPTSSBQ8NFR3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SPTSSBQ8NFR3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPTSSBQ8NFR3 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SPTSSBQ8NFR3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPTSSBQ8NFR3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPTSSBQ8NFR3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SPTSSBQ8NFR3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SPTSSBQ8NFR3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPTSSBQ8NFR3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPTSSBQ8NFR3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPTSSBQ8NFR3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms