Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LINC00346Q8IVM7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
LINC00346Q8IVM7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LINC00346Q8IVM7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LINC00346Q8IVM7 SETD8P1-201ENST00000623146 1180 ntBASIC23.5■■□□□ 1.35
LINC00346Q8IVM7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LINC00346Q8IVM7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LINC00346Q8IVM7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LINC00346Q8IVM7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
LINC00346Q8IVM7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LINC00346Q8IVM7 AC139426.1-201ENST00000568218 2529 ntBASIC23.49■■□□□ 1.35
LINC00346Q8IVM7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LINC00346Q8IVM7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LINC00346Q8IVM7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
LINC00346Q8IVM7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LINC00346Q8IVM7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LINC00346Q8IVM7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
LINC00346Q8IVM7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.48■■□□□ 1.35
LINC00346Q8IVM7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LINC00346Q8IVM7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LINC00346Q8IVM7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.46■■□□□ 1.35
LINC00346Q8IVM7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
LINC00346Q8IVM7 AL135925.1-201ENST00000605920 1701 ntBASIC23.45■■□□□ 1.34
LINC00346Q8IVM7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
LINC00346Q8IVM7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
LINC00346Q8IVM7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.44■■□□□ 1.34
LINC00346Q8IVM7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
LINC00346Q8IVM7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
LINC00346Q8IVM7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
LINC00346Q8IVM7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
LINC00346Q8IVM7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.41■■□□□ 1.34
LINC00346Q8IVM7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
LINC00346Q8IVM7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
LINC00346Q8IVM7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
LINC00346Q8IVM7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
LINC00346Q8IVM7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
LINC00346Q8IVM7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
LINC00346Q8IVM7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
LINC00346Q8IVM7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
LINC00346Q8IVM7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
LINC00346Q8IVM7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.38■■□□□ 1.33
LINC00346Q8IVM7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
LINC00346Q8IVM7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
LINC00346Q8IVM7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LINC00346Q8IVM7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LINC00346Q8IVM7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LINC00346Q8IVM7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LINC00346Q8IVM7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
LINC00346Q8IVM7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.35■■□□□ 1.33
LINC00346Q8IVM7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.35■■□□□ 1.33
LINC00346Q8IVM7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LINC00346Q8IVM7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LINC00346Q8IVM7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LINC00346Q8IVM7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LINC00346Q8IVM7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
LINC00346Q8IVM7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.33■■□□□ 1.33
LINC00346Q8IVM7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.32■■□□□ 1.32
LINC00346Q8IVM7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
LINC00346Q8IVM7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LINC00346Q8IVM7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
LINC00346Q8IVM7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LINC00346Q8IVM7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
LINC00346Q8IVM7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.32■■□□□ 1.32
LINC00346Q8IVM7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
LINC00346Q8IVM7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
LINC00346Q8IVM7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
LINC00346Q8IVM7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
LINC00346Q8IVM7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
LINC00346Q8IVM7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
LINC00346Q8IVM7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
LINC00346Q8IVM7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LINC00346Q8IVM7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LINC00346Q8IVM7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LINC00346Q8IVM7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
LINC00346Q8IVM7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LINC00346Q8IVM7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LINC00346Q8IVM7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.26■■□□□ 1.31
LINC00346Q8IVM7 AC136428.2-201ENST00000563187 214 ntBASIC23.26■■□□□ 1.31
LINC00346Q8IVM7 AC097358.2-201ENST00000607541 1159 ntBASIC23.26■■□□□ 1.31
LINC00346Q8IVM7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LINC00346Q8IVM7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.25■■□□□ 1.31
LINC00346Q8IVM7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LINC00346Q8IVM7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
LINC00346Q8IVM7 AL391121.1-201ENST00000607967 1349 ntBASIC23.24■■□□□ 1.31
LINC00346Q8IVM7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LINC00346Q8IVM7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LINC00346Q8IVM7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
LINC00346Q8IVM7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
LINC00346Q8IVM7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LINC00346Q8IVM7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LINC00346Q8IVM7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.21■■□□□ 1.31
LINC00346Q8IVM7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
LINC00346Q8IVM7 CAHM-201ENST00000604200 896 ntBASIC23.21■■□□□ 1.31
LINC00346Q8IVM7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LINC00346Q8IVM7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.19■■□□□ 1.3
LINC00346Q8IVM7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LINC00346Q8IVM7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
LINC00346Q8IVM7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LINC00346Q8IVM7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.18■■□□□ 1.3
LINC00346Q8IVM7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms