Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CRLF3Q8IUI8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
CRLF3Q8IUI8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
CRLF3Q8IUI8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.44■■□□□ 1.82
CRLF3Q8IUI8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.43■■□□□ 1.82
CRLF3Q8IUI8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.43■■□□□ 1.82
CRLF3Q8IUI8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
CRLF3Q8IUI8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.43■■□□□ 1.82
CRLF3Q8IUI8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CRLF3Q8IUI8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CRLF3Q8IUI8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.42■■□□□ 1.82
CRLF3Q8IUI8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CRLF3Q8IUI8 AL161658.1-201ENST00000623641 1967 ntBASIC26.41■■□□□ 1.82
CRLF3Q8IUI8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.39■■□□□ 1.82
CRLF3Q8IUI8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
CRLF3Q8IUI8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.38■■□□□ 1.81
CRLF3Q8IUI8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CRLF3Q8IUI8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.36■■□□□ 1.81
CRLF3Q8IUI8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CRLF3Q8IUI8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.35■■□□□ 1.81
CRLF3Q8IUI8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
CRLF3Q8IUI8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CRLF3Q8IUI8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.34■■□□□ 1.81
CRLF3Q8IUI8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CRLF3Q8IUI8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.33■■□□□ 1.81
CRLF3Q8IUI8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
CRLF3Q8IUI8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CRLF3Q8IUI8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CRLF3Q8IUI8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CRLF3Q8IUI8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CRLF3Q8IUI8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CRLF3Q8IUI8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CRLF3Q8IUI8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CRLF3Q8IUI8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CRLF3Q8IUI8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CRLF3Q8IUI8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.3■■□□□ 1.8
CRLF3Q8IUI8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CRLF3Q8IUI8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CRLF3Q8IUI8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CRLF3Q8IUI8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CRLF3Q8IUI8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
CRLF3Q8IUI8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CRLF3Q8IUI8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CRLF3Q8IUI8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CRLF3Q8IUI8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CRLF3Q8IUI8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CRLF3Q8IUI8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CRLF3Q8IUI8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CRLF3Q8IUI8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CRLF3Q8IUI8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CRLF3Q8IUI8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CRLF3Q8IUI8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.23■■□□□ 1.79
CRLF3Q8IUI8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CRLF3Q8IUI8 RARRES2P7-201ENST00000567349 469 ntBASIC26.22■■□□□ 1.79
CRLF3Q8IUI8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.21■■□□□ 1.79
CRLF3Q8IUI8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
CRLF3Q8IUI8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CRLF3Q8IUI8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CRLF3Q8IUI8 AC142086.6-201ENST00000621154 1765 ntBASIC26.2■■□□□ 1.78
CRLF3Q8IUI8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CRLF3Q8IUI8 AL135925.1-201ENST00000605920 1701 ntBASIC26.19■■□□□ 1.78
CRLF3Q8IUI8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
CRLF3Q8IUI8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CRLF3Q8IUI8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CRLF3Q8IUI8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CRLF3Q8IUI8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CRLF3Q8IUI8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.18■■□□□ 1.78
CRLF3Q8IUI8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
CRLF3Q8IUI8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.18■■□□□ 1.78
CRLF3Q8IUI8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.18■■□□□ 1.78
CRLF3Q8IUI8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CRLF3Q8IUI8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
CRLF3Q8IUI8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CRLF3Q8IUI8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CRLF3Q8IUI8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
CRLF3Q8IUI8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CRLF3Q8IUI8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.15■■□□□ 1.78
CRLF3Q8IUI8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.15■■□□□ 1.78
CRLF3Q8IUI8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CRLF3Q8IUI8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
CRLF3Q8IUI8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
CRLF3Q8IUI8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CRLF3Q8IUI8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CRLF3Q8IUI8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.14■■□□□ 1.78
CRLF3Q8IUI8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CRLF3Q8IUI8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CRLF3Q8IUI8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
CRLF3Q8IUI8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CRLF3Q8IUI8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CRLF3Q8IUI8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.12■■□□□ 1.77
CRLF3Q8IUI8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CRLF3Q8IUI8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CRLF3Q8IUI8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.11■■□□□ 1.77
CRLF3Q8IUI8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CRLF3Q8IUI8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.11■■□□□ 1.77
CRLF3Q8IUI8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CRLF3Q8IUI8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.1■■□□□ 1.77
CRLF3Q8IUI8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CRLF3Q8IUI8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
CRLF3Q8IUI8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms