Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27,15■■□□□ 1,94
Sh3tc2Q80VA5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27,14■■□□□ 1,94
Sh3tc2Q80VA5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27,12■■□□□ 1,93
Sh3tc2Q80VA5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27,12■■□□□ 1,93
Sh3tc2Q80VA5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27,12■■□□□ 1,93
Sh3tc2Q80VA5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27,11■■□□□ 1,93
Sh3tc2Q80VA5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27,11■■□□□ 1,93
Sh3tc2Q80VA5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27,1■■□□□ 1,93
Sh3tc2Q80VA5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27,1■■□□□ 1,93
Sh3tc2Q80VA5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27,08■■□□□ 1,93
Sh3tc2Q80VA5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC27,08■■□□□ 1,93
Sh3tc2Q80VA5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27,08■■□□□ 1,93
Sh3tc2Q80VA5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27,07■■□□□ 1,92
Sh3tc2Q80VA5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27,07■■□□□ 1,92
Sh3tc2Q80VA5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27,06■■□□□ 1,92
Sh3tc2Q80VA5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27,06■■□□□ 1,92
Sh3tc2Q80VA5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27,06■■□□□ 1,92
Sh3tc2Q80VA5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC27,06■■□□□ 1,92
Sh3tc2Q80VA5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27,05■■□□□ 1,92
Sh3tc2Q80VA5 Nkain2-201ENSMUST00000092602 558 ntBASIC27,05■■□□□ 1,92
Sh3tc2Q80VA5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC27,03■■□□□ 1,92
Sh3tc2Q80VA5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27,02■■□□□ 1,92
Sh3tc2Q80VA5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27,02■■□□□ 1,92
Sh3tc2Q80VA5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27,02■■□□□ 1,92
Sh3tc2Q80VA5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC27,02■■□□□ 1,92
Sh3tc2Q80VA5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27,02■■□□□ 1,92
Sh3tc2Q80VA5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27,02■■□□□ 1,92
Sh3tc2Q80VA5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC27,01■■□□□ 1,92
Sh3tc2Q80VA5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27,01■■□□□ 1,91
Sh3tc2Q80VA5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27,01■■□□□ 1,91
Sh3tc2Q80VA5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC27■■□□□ 1,91
Sh3tc2Q80VA5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1,91
Sh3tc2Q80VA5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26,99■■□□□ 1,91
Sh3tc2Q80VA5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26,98■■□□□ 1,91
Sh3tc2Q80VA5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26,98■■□□□ 1,91
Sh3tc2Q80VA5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26,97■■□□□ 1,91
Sh3tc2Q80VA5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26,95■■□□□ 1,9
Sh3tc2Q80VA5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26,95■■□□□ 1,9
Sh3tc2Q80VA5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26,95■■□□□ 1,9
Sh3tc2Q80VA5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26,93■■□□□ 1,9
Sh3tc2Q80VA5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26,93■■□□□ 1,9
Sh3tc2Q80VA5 Gm7432-201ENSMUST00000210343 879 ntBASIC26,93■■□□□ 1,9
Sh3tc2Q80VA5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26,93■■□□□ 1,9
Sh3tc2Q80VA5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26,91■■□□□ 1,9
Sh3tc2Q80VA5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26,91■■□□□ 1,9
Sh3tc2Q80VA5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26,91■■□□□ 1,9
Sh3tc2Q80VA5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26,9■■□□□ 1,9
Sh3tc2Q80VA5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26,89■■□□□ 1,9
Sh3tc2Q80VA5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26,89■■□□□ 1,89
Sh3tc2Q80VA5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26,88■■□□□ 1,89
Sh3tc2Q80VA5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26,88■■□□□ 1,89
Sh3tc2Q80VA5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26,85■■□□□ 1,89
Sh3tc2Q80VA5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26,85■■□□□ 1,89
Sh3tc2Q80VA5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26,85■■□□□ 1,89
Sh3tc2Q80VA5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26,85■■□□□ 1,89
Sh3tc2Q80VA5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26,84■■□□□ 1,89
Sh3tc2Q80VA5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26,84■■□□□ 1,89
Sh3tc2Q80VA5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26,83■■□□□ 1,89
Sh3tc2Q80VA5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26,83■■□□□ 1,89
Sh3tc2Q80VA5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26,83■■□□□ 1,89
Sh3tc2Q80VA5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26,83■■□□□ 1,88
Sh3tc2Q80VA5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26,82■■□□□ 1,88
Sh3tc2Q80VA5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26,81■■□□□ 1,88
Sh3tc2Q80VA5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26,8■■□□□ 1,88
Sh3tc2Q80VA5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26,8■■□□□ 1,88
Sh3tc2Q80VA5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26,8■■□□□ 1,88
Sh3tc2Q80VA5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26,8■■□□□ 1,88
Sh3tc2Q80VA5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26,78■■□□□ 1,88
Sh3tc2Q80VA5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26,78■■□□□ 1,88
Sh3tc2Q80VA5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26,78■■□□□ 1,88
Sh3tc2Q80VA5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26,78■■□□□ 1,88
Sh3tc2Q80VA5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26,77■■□□□ 1,88
Sh3tc2Q80VA5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26,77■■□□□ 1,88
Sh3tc2Q80VA5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26,75■■□□□ 1,87
Sh3tc2Q80VA5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26,75■■□□□ 1,87
Sh3tc2Q80VA5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26,75■■□□□ 1,87
Sh3tc2Q80VA5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26,74■■□□□ 1,87
Sh3tc2Q80VA5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26,73■■□□□ 1,87
Sh3tc2Q80VA5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26,73■■□□□ 1,87
Sh3tc2Q80VA5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26,73■■□□□ 1,87
Sh3tc2Q80VA5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26,72■■□□□ 1,87
Sh3tc2Q80VA5 Gm11599-201ENSMUST00000118720 878 ntBASIC26,72■■□□□ 1,87
Sh3tc2Q80VA5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26,72■■□□□ 1,87
Sh3tc2Q80VA5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26,72■■□□□ 1,87
Sh3tc2Q80VA5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26,72■■□□□ 1,87
Sh3tc2Q80VA5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26,72■■□□□ 1,87
Sh3tc2Q80VA5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26,71■■□□□ 1,87
Sh3tc2Q80VA5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26,71■■□□□ 1,87
Sh3tc2Q80VA5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26,71■■□□□ 1,87
Sh3tc2Q80VA5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26,69■■□□□ 1,86
Sh3tc2Q80VA5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26,69■■□□□ 1,86
Sh3tc2Q80VA5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26,69■■□□□ 1,86
Sh3tc2Q80VA5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26,68■■□□□ 1,86
Sh3tc2Q80VA5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26,68■■□□□ 1,86
Sh3tc2Q80VA5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26,68■■□□□ 1,86
Sh3tc2Q80VA5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26,68■■□□□ 1,86
Sh3tc2Q80VA5 Gm30346-201ENSMUST00000218641 1699 ntBASIC26,67■■□□□ 1,86
Sh3tc2Q80VA5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26,66■■□□□ 1,86
Sh3tc2Q80VA5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26,65■■□□□ 1,86
Sh3tc2Q80VA5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26,63■■□□□ 1,85
Retrieved 100 of 76,532 protein–RNA pairs in 57,1 ms