RNA–Protein interactions for RNA: ENSMUST00000126171.8

Tgfbr1-205, Transcript of TGF-beta receptor type-1, mousemouse

TSL 5 BASIC

Gene Tgfbr1, Length 1,829 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1-205ENSMUST00000126171 Gm35339A0A140LHH9 1649 aa54.56■■■■■ 6.32
Tgfbr1-205ENSMUST00000126171 NischQ80TM9 1593 aa54.43■■■■■ 6.3
Tgfbr1-205ENSMUST00000126171 Abcc9P70170 1546 aa52.8■■■■■ 6.04
Tgfbr1-205ENSMUST00000126171 Abcc8B2RUS7 1588 aa52.16■■■■■ 5.94
Tgfbr1-205ENSMUST00000126171 ScribQ80U72 1612 aa49.49■■■■■ 5.51
Tgfbr1-205ENSMUST00000126171 Dcaf1Q80TR8 1506 aa48.49■■■■■ 5.35
Tgfbr1-205ENSMUST00000126171 Rhox8Q6VSS7 320 aa48.42■■■■■ 5.34
Tgfbr1-205ENSMUST00000126171 Kdm5dQ62240 1548 aa48.2■■■■■ 5.31
Tgfbr1-205ENSMUST00000126171 NacadQ5SWP3 1504 aa48.14■■■■■ 5.3
Tgfbr1-205ENSMUST00000126171 Rb1cc1Q9ESK9 1588 aa47.59■■■■■ 5.21
Tgfbr1-205ENSMUST00000126171 Ccdc180J3QNE4 1664 aa47.29■■■■■ 5.16
Tgfbr1-205ENSMUST00000126171 Sycp2Q9CUU3 1500 aa47.1■■■■■ 5.13
Tgfbr1-205ENSMUST00000126171 Baz1aO88379 1555 aa47.01■■■■■ 5.12
Tgfbr1-205ENSMUST00000126171 Rtl1Q7M732 1744 aa46.64■■■■■ 5.06
Tgfbr1-205ENSMUST00000126171 Crybg2B7ZCC2 1516 aa46.59■■■■■ 5.05
Tgfbr1-205ENSMUST00000126171 BicraF8VPZ9 1578 aa46.2■■■■■ 4.99
Tgfbr1-205ENSMUST00000126171 Zcchc6Q5BLK4 1491 aaKnown RBP46.07■■■■■ 4.96
Tgfbr1-205ENSMUST00000126171 Smarca2Q6DIC0 1577 aa45.76■■■■■ 4.92
Tgfbr1-205ENSMUST00000126171 Ccdc136Q3TVA9 1136 aa45.03■■■■■ 4.8
Tgfbr1-205ENSMUST00000126171 Cecr2E9Q2Z1 1453 aa44.94■■■■■ 4.79
Tgfbr1-205ENSMUST00000126171 Smarca4Q3TKT4 1613 aaKnown RBP44.76■■■■■ 4.76
Tgfbr1-205ENSMUST00000126171 Pds5bQ4VA53 1446 aaKnown RBP44.67■■■■■ 4.74
Tgfbr1-205ENSMUST00000126171 Brd4Q9ESU6 1400 aaKnown RBP44.59■■■■■ 4.73
Tgfbr1-205ENSMUST00000126171 Atad2bE9Q166 1460 aaKnown RBP44.52■■■■■ 4.72
Tgfbr1-205ENSMUST00000126171 Trim41Q5NCC3 630 aa44.48■■■■■ 4.71
Tgfbr1-205ENSMUST00000126171 Synj1Q8CHC4 1574 aa44.32■■■■■ 4.68
Tgfbr1-205ENSMUST00000126171 Iqgap2Q3UQ44 1575 aa44.31■■■■■ 4.68
Tgfbr1-205ENSMUST00000126171 Cttnbp2B9EJA2 1648 aa44.26■■■■■ 4.68
Tgfbr1-205ENSMUST00000126171 CftrP26361 1476 aa44.24■■■■■ 4.67
Tgfbr1-205ENSMUST00000126171 Ercc6F8VPZ5 1481 aa43.83■■■■■ 4.61
Tgfbr1-205ENSMUST00000126171 Thoc2B1AZI6 1594 aaKnown RBP43.76■■■■■ 4.6
Tgfbr1-205ENSMUST00000126171 Wdr62Q3U3T8 1523 aa43.68■■■■■ 4.58
Tgfbr1-205ENSMUST00000126171 Esf1Q3V1V3 845 aaKnown RBP43.63■■■■■ 4.57
Tgfbr1-205ENSMUST00000126171 Frmpd1A2AKB4 1549 aa43.59■■■■■ 4.57
Tgfbr1-205ENSMUST00000126171 Golga3P55937 1487 aa43.49■■■■■ 4.55
Tgfbr1-205ENSMUST00000126171 Cngb1E1AZ71 1325 aa43.31■■■■■ 4.52
Tgfbr1-205ENSMUST00000126171 Top2bQ64511 1612 aa43.3■■■■■ 4.52
Tgfbr1-205ENSMUST00000126171 HrcG5E8J6 738 aa43.21■■■■■ 4.51
Tgfbr1-205ENSMUST00000126171 Unc13aQ4KUS2 1712 aa43.18■■■■■ 4.5
Tgfbr1-205ENSMUST00000126171 Cc2d2aQ8CFW7 1633 aa43.16■■■■■ 4.5
Tgfbr1-205ENSMUST00000126171 Fam135aQ6NS59 1506 aa43.06■■■■■ 4.48
Tgfbr1-205ENSMUST00000126171 Phldb1Q6PDH0 1371 aaKnown RBP43.04■■■■■ 4.48
Tgfbr1-205ENSMUST00000126171 Fmn1Q05860 1466 aa42.74■■■■■ 4.43
Tgfbr1-205ENSMUST00000126171 Rsf1E9PWW9 1441 aaKnown RBP42.74■■■■■ 4.43
Tgfbr1-205ENSMUST00000126171 Dnajc5bQ9CQ94 199 aa42.74■■■■■ 4.43
Tgfbr1-205ENSMUST00000126171 Lamc3Q9R0B6 1581 aa42.67■■■■■ 4.42
Tgfbr1-205ENSMUST00000126171 Baz1bQ9Z277 1479 aa42.64■■■■■ 4.42
Tgfbr1-205ENSMUST00000126171 Ccdc88bQ4QRL3 1481 aa42.63■■■■■ 4.41
Tgfbr1-205ENSMUST00000126171 TnnQ80Z71 1560 aa42.61■■■■■ 4.41
Tgfbr1-205ENSMUST00000126171 Cep164Q5DU05 1446 aa42.57■■■■■ 4.41
Tgfbr1-205ENSMUST00000126171 Ubl4bQ9CQ84 188 aa42.57■■■■■ 4.4
Tgfbr1-205ENSMUST00000126171 Kif15Q6P9L6 1387 aa42.53■■■■■ 4.4
Tgfbr1-205ENSMUST00000126171 Chic1Q8CBW7 227 aa42.46■■■■■ 4.39
Tgfbr1-205ENSMUST00000126171 Top2aQ01320 1528 aaKnown RBP42.21■■■■■ 4.35
Tgfbr1-205ENSMUST00000126171 Cux2P70298 1426 aa42.18■■■■■ 4.34
Tgfbr1-205ENSMUST00000126171 Ccdc18Q640L5 1455 aa42.09■■■■■ 4.33
Tgfbr1-205ENSMUST00000126171 Mrc2Q64449 1479 aa42.08■■■■■ 4.33
Tgfbr1-205ENSMUST00000126171 Camsap1A2AHC3 1581 aa42.08■■■■■ 4.33
Tgfbr1-205ENSMUST00000126171 Npm1Q61937 292 aaKnown RBP41.87■■■■■ 4.29
Tgfbr1-205ENSMUST00000126171 Il27Q8K3I6 234 aa41.85■■■■■ 4.29
Tgfbr1-205ENSMUST00000126171 Gab3Q8BSM5 595 aa41.75■■■■■ 4.27
Tgfbr1-205ENSMUST00000126171 Grin2bQ01097 1482 aa41.61■■■■■ 4.25
Tgfbr1-205ENSMUST00000126171 Kif21aQ9QXL2 1672 aa41.6■■■■■ 4.25
Tgfbr1-205ENSMUST00000126171 LrpprcQ6PB66 1392 aaKnown RBP41.57■■■■■ 4.25
Tgfbr1-205ENSMUST00000126171 NrkQ9R0G8 1455 aa41.52■■■■■ 4.24
Tgfbr1-205ENSMUST00000126171 Rapgef2Q8CHG7 1496 aa41.48■■■■■ 4.23
Tgfbr1-205ENSMUST00000126171 PogzQ8BZH4 1409 aaKnown RBP41.43■■■■■ 4.22
Tgfbr1-205ENSMUST00000126171 Shroom4Q1W617 1475 aa41.4■■■■■ 4.22
Tgfbr1-205ENSMUST00000126171 Dhx29Q6PGC1 1365 aaKnown RBP41.38■■■■■ 4.22
Tgfbr1-205ENSMUST00000126171 Npm2Q80W85 207 aa41.32■■■■■ 4.2
Tgfbr1-205ENSMUST00000126171 Crocc2F6XLV1 1638 aa41.29■■■■■ 4.2
Tgfbr1-205ENSMUST00000126171 Duox2A2AQ99 1517 aa41.29■■■■■ 4.2
Tgfbr1-205ENSMUST00000126171 PtprkP35822 1457 aa41.29■■■■■ 4.2
Tgfbr1-205ENSMUST00000126171 Efcab5A0JP43 1406 aa41.26■■■■■ 4.2
Tgfbr1-205ENSMUST00000126171 Cep162Q6ZQ06 1403 aa41.16■■■■■ 4.18
Tgfbr1-205ENSMUST00000126171 Lrriq1Q0P5X1 1673 aa41.1■■■■■ 4.17
Tgfbr1-205ENSMUST00000126171 Eif4g1Q6NZJ6 1600 aaKnown RBP41.1■■■■■ 4.17
Tgfbr1-205ENSMUST00000126171 Samd9lQ69Z37 1561 aa41■■■■■ 4.15
Tgfbr1-205ENSMUST00000126171 Plb1Q3TTY0 1478 aa40.95■■■■■ 4.15
Tgfbr1-205ENSMUST00000126171 Arhgap35Q91YM2 1499 aa40.95■■■■■ 4.15
Tgfbr1-205ENSMUST00000126171 Urb2E9Q7L1 1524 aaKnown RBP40.93■■■■■ 4.14
Tgfbr1-205ENSMUST00000126171 Map3k1P53349 1493 aa40.91■■■■■ 4.14
Tgfbr1-205ENSMUST00000126171 Mroh2bQ7M6Y6 1581 aa40.9■■■■■ 4.14
Tgfbr1-205ENSMUST00000126171 Zeb1Q64318 1117 aa40.89■■■■■ 4.14
Tgfbr1-205ENSMUST00000126171 SynmQ70IV5 1561 aa40.79■■■■■ 4.12
Tgfbr1-205ENSMUST00000126171 Myt1lP97500 1187 aa40.79■■■■■ 4.12
Tgfbr1-205ENSMUST00000126171 Ift140E9PY46 1464 aa40.74■■■■■ 4.11
Tgfbr1-205ENSMUST00000126171 AqrQ8CFQ3 1481 aaKnown RBP40.68■■■■■ 4.1
Tgfbr1-205ENSMUST00000126171 Rad54l2Q99NG0 1466 aa40.66■■■■■ 4.1
Tgfbr1-205ENSMUST00000126171 Pbrm1Q8BSQ9 1634 aaKnown RBP40.64■■■■■ 4.1
Tgfbr1-205ENSMUST00000126171 Disp1Q3TDN0 1521 aa40.6■■■■■ 4.09
Tgfbr1-205ENSMUST00000126171 Clip1Q922J3 1391 aa40.59■■■■■ 4.09
Tgfbr1-205ENSMUST00000126171 Carmil1Q6EDY6 1374 aa40.55■■■■■ 4.08
Tgfbr1-205ENSMUST00000126171 Eif4g3Q80XI3 1579 aaKnown RBP40.53■■■■■ 4.08
Tgfbr1-205ENSMUST00000126171 Setd1bQ8CFT2 1985 aa40.53■■■■■ 4.08
Tgfbr1-205ENSMUST00000126171 Magi3Q9EQJ9 1476 aa40.52■■■■■ 4.08
Tgfbr1-205ENSMUST00000126171 Grin2aP35436 1464 aa40.5■■■■■ 4.07
Tgfbr1-205ENSMUST00000126171 Pla2r1Q62028 1487 aa40.44■■■■■ 4.06
Tgfbr1-205ENSMUST00000126171 Nup160Q9Z0W3 1402 aaKnown RBP40.41■■■■■ 4.06
Tgfbr1-205ENSMUST00000126171 Polr1aO35134 1717 aaKnown RBP40.39■■■■■ 4.06
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms