RNA–Protein interactions for RNA: ENSMUST00000000388.14

Ccm2-201, Transcript of Cerebral cavernous malformations protein 2 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccm2, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccm2-201ENSMUST00000000388 Gm35339A0A140LHH9 1649 aa54.72■■■■■ 6.35
Ccm2-201ENSMUST00000000388 NischQ80TM9 1593 aa54.34■■■■■ 6.29
Ccm2-201ENSMUST00000000388 Abcc9P70170 1546 aa52.66■■■■■ 6.02
Ccm2-201ENSMUST00000000388 Abcc8B2RUS7 1588 aa52.31■■■■■ 5.96
Ccm2-201ENSMUST00000000388 ScribQ80U72 1612 aa50.09■■■■■ 5.61
Ccm2-201ENSMUST00000000388 Kdm5dQ62240 1548 aa48.57■■■■■ 5.37
Ccm2-201ENSMUST00000000388 NacadQ5SWP3 1504 aa48.48■■■■■ 5.35
Ccm2-201ENSMUST00000000388 Dcaf1Q80TR8 1506 aa48.26■■■■■ 5.32
Ccm2-201ENSMUST00000000388 Rhox8Q6VSS7 320 aa48.08■■■■■ 5.29
Ccm2-201ENSMUST00000000388 Sycp2Q9CUU3 1500 aa47.52■■■■■ 5.2
Ccm2-201ENSMUST00000000388 Rb1cc1Q9ESK9 1588 aa47.46■■■■■ 5.19
Ccm2-201ENSMUST00000000388 Rtl1Q7M732 1744 aa47.36■■■■■ 5.17
Ccm2-201ENSMUST00000000388 BicraF8VPZ9 1578 aa46.82■■■■■ 5.09
Ccm2-201ENSMUST00000000388 Ccdc180J3QNE4 1664 aa46.8■■■■■ 5.08
Ccm2-201ENSMUST00000000388 Baz1aO88379 1555 aa46.79■■■■■ 5.08
Ccm2-201ENSMUST00000000388 Crybg2B7ZCC2 1516 aa46.37■■■■■ 5.01
Ccm2-201ENSMUST00000000388 Zcchc6Q5BLK4 1491 aaKnown RBP46.02■■■■■ 4.96
Ccm2-201ENSMUST00000000388 Smarca2Q6DIC0 1577 aa45.52■■■■■ 4.88
Ccm2-201ENSMUST00000000388 Pds5bQ4VA53 1446 aaKnown RBP45.21■■■■■ 4.83
Ccm2-201ENSMUST00000000388 Cecr2E9Q2Z1 1453 aa45.13■■■■■ 4.81
Ccm2-201ENSMUST00000000388 Atad2bE9Q166 1460 aaKnown RBP44.96■■■■■ 4.79
Ccm2-201ENSMUST00000000388 Smarca4Q3TKT4 1613 aaKnown RBP44.95■■■■■ 4.79
Ccm2-201ENSMUST00000000388 Ccdc136Q3TVA9 1136 aa44.68■■■■■ 4.74
Ccm2-201ENSMUST00000000388 Thoc2B1AZI6 1594 aaKnown RBP44.65■■■■■ 4.74
Ccm2-201ENSMUST00000000388 Iqgap2Q3UQ44 1575 aa44.63■■■■■ 4.73
Ccm2-201ENSMUST00000000388 Dnajc5bQ9CQ94 199 aa44.49■■■■■ 4.71
Ccm2-201ENSMUST00000000388 Ercc6F8VPZ5 1481 aa44.32■■■■■ 4.69
Ccm2-201ENSMUST00000000388 Synj1Q8CHC4 1574 aa44.23■■■■■ 4.67
Ccm2-201ENSMUST00000000388 Brd4Q9ESU6 1400 aaKnown RBP44.21■■■■■ 4.67
Ccm2-201ENSMUST00000000388 CftrP26361 1476 aa44.17■■■■■ 4.66
Ccm2-201ENSMUST00000000388 Cttnbp2B9EJA2 1648 aa44.11■■■■■ 4.65
Ccm2-201ENSMUST00000000388 Wdr62Q3U3T8 1523 aa44.11■■■■■ 4.65
Ccm2-201ENSMUST00000000388 Frmpd1A2AKB4 1549 aa44.06■■■■■ 4.64
Ccm2-201ENSMUST00000000388 Trim41Q5NCC3 630 aa44.01■■■■■ 4.64
Ccm2-201ENSMUST00000000388 Cc2d2aQ8CFW7 1633 aa44.01■■■■■ 4.64
Ccm2-201ENSMUST00000000388 HrcG5E8J6 738 aa43.77■■■■■ 4.6
Ccm2-201ENSMUST00000000388 Fam135aQ6NS59 1506 aa43.76■■■■■ 4.6
Ccm2-201ENSMUST00000000388 Unc13aQ4KUS2 1712 aa43.61■■■■■ 4.57
Ccm2-201ENSMUST00000000388 Phldb1Q6PDH0 1371 aaKnown RBP43.55■■■■■ 4.56
Ccm2-201ENSMUST00000000388 Esf1Q3V1V3 845 aaKnown RBP43.42■■■■■ 4.54
Ccm2-201ENSMUST00000000388 Golga3P55937 1487 aa43.24■■■■■ 4.51
Ccm2-201ENSMUST00000000388 Ubl4bQ9CQ84 188 aa43.15■■■■■ 4.5
Ccm2-201ENSMUST00000000388 Top2bQ64511 1612 aa43.1■■■■■ 4.49
Ccm2-201ENSMUST00000000388 Baz1bQ9Z277 1479 aa43.06■■■■■ 4.48
Ccm2-201ENSMUST00000000388 Cep164Q5DU05 1446 aa42.98■■■■■ 4.47
Ccm2-201ENSMUST00000000388 Cngb1E1AZ71 1325 aa42.87■■■■■ 4.45
Ccm2-201ENSMUST00000000388 Rsf1E9PWW9 1441 aaKnown RBP42.81■■■■■ 4.44
Ccm2-201ENSMUST00000000388 Mrc2Q64449 1479 aa42.73■■■■■ 4.43
Ccm2-201ENSMUST00000000388 Kif15Q6P9L6 1387 aa42.72■■■■■ 4.43
Ccm2-201ENSMUST00000000388 Lamc3Q9R0B6 1581 aa42.7■■■■■ 4.43
Ccm2-201ENSMUST00000000388 Ccdc88bQ4QRL3 1481 aa42.69■■■■■ 4.42
Ccm2-201ENSMUST00000000388 Chic1Q8CBW7 227 aa42.53■■■■■ 4.4
Ccm2-201ENSMUST00000000388 Cux2P70298 1426 aa42.52■■■■■ 4.4
Ccm2-201ENSMUST00000000388 TnnQ80Z71 1560 aa42.47■■■■■ 4.39
Ccm2-201ENSMUST00000000388 Fmn1Q05860 1466 aa42.33■■■■■ 4.37
Ccm2-201ENSMUST00000000388 Kif21aQ9QXL2 1672 aa42.11■■■■■ 4.33
Ccm2-201ENSMUST00000000388 Npm1Q61937 292 aaKnown RBP42.06■■■■■ 4.32
Ccm2-201ENSMUST00000000388 Camsap1A2AHC3 1581 aa42.06■■■■■ 4.32
Ccm2-201ENSMUST00000000388 Top2aQ01320 1528 aaKnown RBP42.04■■■■■ 4.32
Ccm2-201ENSMUST00000000388 Ccdc18Q640L5 1455 aa42.02■■■■■ 4.32
Ccm2-201ENSMUST00000000388 Il27Q8K3I6 234 aa42■■■■■ 4.31
Ccm2-201ENSMUST00000000388 Lrriq1Q0P5X1 1673 aa41.84■■■■■ 4.29
Ccm2-201ENSMUST00000000388 Gab3Q8BSM5 595 aa41.75■■■■■ 4.27
Ccm2-201ENSMUST00000000388 LrpprcQ6PB66 1392 aaKnown RBP41.71■■■■■ 4.27
Ccm2-201ENSMUST00000000388 Dhx29Q6PGC1 1365 aaKnown RBP41.68■■■■■ 4.26
Ccm2-201ENSMUST00000000388 Rapgef2Q8CHG7 1496 aa41.6■■■■■ 4.25
Ccm2-201ENSMUST00000000388 PogzQ8BZH4 1409 aaKnown RBP41.54■■■■■ 4.24
Ccm2-201ENSMUST00000000388 Grin2bQ01097 1482 aa41.53■■■■■ 4.24
Ccm2-201ENSMUST00000000388 Crocc2F6XLV1 1638 aa41.51■■■■■ 4.24
Ccm2-201ENSMUST00000000388 Urb2E9Q7L1 1524 aaKnown RBP41.43■■■■■ 4.22
Ccm2-201ENSMUST00000000388 Plb1Q3TTY0 1478 aa41.41■■■■■ 4.22
Ccm2-201ENSMUST00000000388 Duox2A2AQ99 1517 aa41.39■■■■■ 4.22
Ccm2-201ENSMUST00000000388 Ehmt2Q9Z148 1263 aaKnown RBP41.35■■■■■ 4.21
Ccm2-201ENSMUST00000000388 Eif4g1Q6NZJ6 1600 aaKnown RBP41.29■■■■■ 4.2
Ccm2-201ENSMUST00000000388 NrkQ9R0G8 1455 aa41.22■■■■■ 4.19
Ccm2-201ENSMUST00000000388 Eif4g3Q80XI3 1579 aaKnown RBP41.2■■■■■ 4.19
Ccm2-201ENSMUST00000000388 Cep162Q6ZQ06 1403 aa41.18■■■■■ 4.18
Ccm2-201ENSMUST00000000388 PtprkP35822 1457 aa41.16■■■■■ 4.18
Ccm2-201ENSMUST00000000388 Samd9lQ69Z37 1561 aa41.15■■■■■ 4.18
Ccm2-201ENSMUST00000000388 Efcab5A0JP43 1406 aa41.15■■■■■ 4.18
Ccm2-201ENSMUST00000000388 Shroom4Q1W617 1475 aa41.1■■■■■ 4.17
Ccm2-201ENSMUST00000000388 Acin1Q9JIX8 1338 aaKnown RBP41.06■■■■■ 4.16
Ccm2-201ENSMUST00000000388 Ift140E9PY46 1464 aa41.02■■■■■ 4.16
Ccm2-201ENSMUST00000000388 Rpgrip1Q9EPQ2 1331 aa41.01■■■■■ 4.16
Ccm2-201ENSMUST00000000388 Disp1Q3TDN0 1521 aa40.91■■■■■ 4.14
Ccm2-201ENSMUST00000000388 Rad54l2Q99NG0 1466 aa40.84■■■■■ 4.13
Ccm2-201ENSMUST00000000388 Arhgap35Q91YM2 1499 aa40.82■■■■■ 4.13
Ccm2-201ENSMUST00000000388 Setd1bQ8CFT2 1985 aa40.82■■■■■ 4.13
Ccm2-201ENSMUST00000000388 Rusc2Q80U22 1514 aa40.77■■■■■ 4.12
Ccm2-201ENSMUST00000000388 Npm2Q80W85 207 aa40.77■■■■■ 4.12
Ccm2-201ENSMUST00000000388 Pbrm1Q8BSQ9 1634 aaKnown RBP40.72■■■■■ 4.11
Ccm2-201ENSMUST00000000388 Magi3Q9EQJ9 1476 aa40.69■■■■■ 4.1
Ccm2-201ENSMUST00000000388 Nup160Q9Z0W3 1402 aaKnown RBP40.69■■■■■ 4.1
Ccm2-201ENSMUST00000000388 SynmQ70IV5 1561 aa40.68■■■■■ 4.1
Ccm2-201ENSMUST00000000388 Map3k1P53349 1493 aa40.66■■■■■ 4.1
Ccm2-201ENSMUST00000000388 Grin2aP35436 1464 aa40.64■■■■■ 4.1
Ccm2-201ENSMUST00000000388 Zeb1Q64318 1117 aa40.62■■■■■ 4.09
Ccm2-201ENSMUST00000000388 Mroh2bQ7M6Y6 1581 aa40.58■■■■■ 4.09
Ccm2-201ENSMUST00000000388 Pla2r1Q62028 1487 aa40.53■■■■■ 4.08
Ccm2-201ENSMUST00000000388 Cc2d2bA0A286YDU8 1405 aa40.51■■■■■ 4.08
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms