RNA–Protein interactions for RNA: ENSMUST00000000388.14

Ccm2-201, Transcript of Cerebral cavernous malformations protein 2 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccm2, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccm2-201ENSMUST00000000388 Gm35339A0A140LHH9 1649 aa54,72■■■■■ 6,35
Ccm2-201ENSMUST00000000388 NischQ80TM9 1593 aa54,34■■■■■ 6,29
Ccm2-201ENSMUST00000000388 Abcc9P70170 1546 aa52,66■■■■■ 6,02
Ccm2-201ENSMUST00000000388 Abcc8B2RUS7 1588 aa52,31■■■■■ 5,96
Ccm2-201ENSMUST00000000388 ScribQ80U72 1612 aa50,09■■■■■ 5,61
Ccm2-201ENSMUST00000000388 Kdm5dQ62240 1548 aa48,57■■■■■ 5,37
Ccm2-201ENSMUST00000000388 NacadQ5SWP3 1504 aa48,48■■■■■ 5,35
Ccm2-201ENSMUST00000000388 Dcaf1Q80TR8 1506 aa48,26■■■■■ 5,32
Ccm2-201ENSMUST00000000388 Rhox8Q6VSS7 320 aa48,08■■■■■ 5,29
Ccm2-201ENSMUST00000000388 Sycp2Q9CUU3 1500 aa47,52■■■■■ 5,2
Ccm2-201ENSMUST00000000388 Rb1cc1Q9ESK9 1588 aa47,46■■■■■ 5,19
Ccm2-201ENSMUST00000000388 Rtl1Q7M732 1744 aa47,36■■■■■ 5,17
Ccm2-201ENSMUST00000000388 BicraF8VPZ9 1578 aa46,82■■■■■ 5,09
Ccm2-201ENSMUST00000000388 Ccdc180J3QNE4 1664 aa46,8■■■■■ 5,08
Ccm2-201ENSMUST00000000388 Baz1aO88379 1555 aa46,79■■■■■ 5,08
Ccm2-201ENSMUST00000000388 Crybg2B7ZCC2 1516 aa46,37■■■■■ 5,01
Ccm2-201ENSMUST00000000388 Zcchc6Q5BLK4 1491 aaKnown RBP46,02■■■■■ 4,96
Ccm2-201ENSMUST00000000388 Smarca2Q6DIC0 1577 aa45,52■■■■■ 4,88
Ccm2-201ENSMUST00000000388 Pds5bQ4VA53 1446 aaKnown RBP45,21■■■■■ 4,83
Ccm2-201ENSMUST00000000388 Cecr2E9Q2Z1 1453 aa45,13■■■■■ 4,81
Ccm2-201ENSMUST00000000388 Atad2bE9Q166 1460 aaKnown RBP44,96■■■■■ 4,79
Ccm2-201ENSMUST00000000388 Smarca4Q3TKT4 1613 aaKnown RBP44,95■■■■■ 4,79
Ccm2-201ENSMUST00000000388 Ccdc136Q3TVA9 1136 aa44,68■■■■■ 4,74
Ccm2-201ENSMUST00000000388 Thoc2B1AZI6 1594 aaKnown RBP44,65■■■■■ 4,74
Ccm2-201ENSMUST00000000388 Iqgap2Q3UQ44 1575 aa44,63■■■■■ 4,73
Ccm2-201ENSMUST00000000388 Dnajc5bQ9CQ94 199 aa44,49■■■■■ 4,71
Ccm2-201ENSMUST00000000388 Ercc6F8VPZ5 1481 aa44,32■■■■■ 4,69
Ccm2-201ENSMUST00000000388 Synj1Q8CHC4 1574 aa44,23■■■■■ 4,67
Ccm2-201ENSMUST00000000388 Brd4Q9ESU6 1400 aaKnown RBP44,21■■■■■ 4,67
Ccm2-201ENSMUST00000000388 CftrP26361 1476 aa44,17■■■■■ 4,66
Ccm2-201ENSMUST00000000388 Cttnbp2B9EJA2 1648 aa44,11■■■■■ 4,65
Ccm2-201ENSMUST00000000388 Wdr62Q3U3T8 1523 aa44,11■■■■■ 4,65
Ccm2-201ENSMUST00000000388 Frmpd1A2AKB4 1549 aa44,06■■■■■ 4,64
Ccm2-201ENSMUST00000000388 Trim41Q5NCC3 630 aa44,01■■■■■ 4,64
Ccm2-201ENSMUST00000000388 Cc2d2aQ8CFW7 1633 aa44,01■■■■■ 4,64
Ccm2-201ENSMUST00000000388 HrcG5E8J6 738 aa43,77■■■■■ 4,6
Ccm2-201ENSMUST00000000388 Fam135aQ6NS59 1506 aa43,76■■■■■ 4,6
Ccm2-201ENSMUST00000000388 Unc13aQ4KUS2 1712 aa43,61■■■■■ 4,57
Ccm2-201ENSMUST00000000388 Phldb1Q6PDH0 1371 aaKnown RBP43,55■■■■■ 4,56
Ccm2-201ENSMUST00000000388 Esf1Q3V1V3 845 aaKnown RBP43,42■■■■■ 4,54
Ccm2-201ENSMUST00000000388 Golga3P55937 1487 aa43,24■■■■■ 4,51
Ccm2-201ENSMUST00000000388 Ubl4bQ9CQ84 188 aa43,15■■■■■ 4,5
Ccm2-201ENSMUST00000000388 Top2bQ64511 1612 aa43,1■■■■■ 4,49
Ccm2-201ENSMUST00000000388 Baz1bQ9Z277 1479 aa43,06■■■■■ 4,48
Ccm2-201ENSMUST00000000388 Cep164Q5DU05 1446 aa42,98■■■■■ 4,47
Ccm2-201ENSMUST00000000388 Cngb1E1AZ71 1325 aa42,87■■■■■ 4,45
Ccm2-201ENSMUST00000000388 Rsf1E9PWW9 1441 aaKnown RBP42,81■■■■■ 4,44
Ccm2-201ENSMUST00000000388 Mrc2Q64449 1479 aa42,73■■■■■ 4,43
Ccm2-201ENSMUST00000000388 Kif15Q6P9L6 1387 aa42,72■■■■■ 4,43
Ccm2-201ENSMUST00000000388 Lamc3Q9R0B6 1581 aa42,7■■■■■ 4,43
Ccm2-201ENSMUST00000000388 Ccdc88bQ4QRL3 1481 aa42,69■■■■■ 4,42
Ccm2-201ENSMUST00000000388 Chic1Q8CBW7 227 aa42,53■■■■■ 4,4
Ccm2-201ENSMUST00000000388 Cux2P70298 1426 aa42,52■■■■■ 4,4
Ccm2-201ENSMUST00000000388 TnnQ80Z71 1560 aa42,47■■■■■ 4,39
Ccm2-201ENSMUST00000000388 Fmn1Q05860 1466 aa42,33■■■■■ 4,37
Ccm2-201ENSMUST00000000388 Kif21aQ9QXL2 1672 aa42,11■■■■■ 4,33
Ccm2-201ENSMUST00000000388 Npm1Q61937 292 aaKnown RBP42,06■■■■■ 4,32
Ccm2-201ENSMUST00000000388 Camsap1A2AHC3 1581 aa42,06■■■■■ 4,32
Ccm2-201ENSMUST00000000388 Top2aQ01320 1528 aaKnown RBP42,04■■■■■ 4,32
Ccm2-201ENSMUST00000000388 Ccdc18Q640L5 1455 aa42,02■■■■■ 4,32
Ccm2-201ENSMUST00000000388 Il27Q8K3I6 234 aa42■■■■■ 4,31
Ccm2-201ENSMUST00000000388 Lrriq1Q0P5X1 1673 aa41,84■■■■■ 4,29
Ccm2-201ENSMUST00000000388 Gab3Q8BSM5 595 aa41,75■■■■■ 4,27
Ccm2-201ENSMUST00000000388 LrpprcQ6PB66 1392 aaKnown RBP41,71■■■■■ 4,27
Ccm2-201ENSMUST00000000388 Dhx29Q6PGC1 1365 aaKnown RBP41,68■■■■■ 4,26
Ccm2-201ENSMUST00000000388 Rapgef2Q8CHG7 1496 aa41,6■■■■■ 4,25
Ccm2-201ENSMUST00000000388 PogzQ8BZH4 1409 aaKnown RBP41,54■■■■■ 4,24
Ccm2-201ENSMUST00000000388 Grin2bQ01097 1482 aa41,53■■■■■ 4,24
Ccm2-201ENSMUST00000000388 Crocc2F6XLV1 1638 aa41,51■■■■■ 4,24
Ccm2-201ENSMUST00000000388 Urb2E9Q7L1 1524 aaKnown RBP41,43■■■■■ 4,22
Ccm2-201ENSMUST00000000388 Plb1Q3TTY0 1478 aa41,41■■■■■ 4,22
Ccm2-201ENSMUST00000000388 Duox2A2AQ99 1517 aa41,39■■■■■ 4,22
Ccm2-201ENSMUST00000000388 Ehmt2Q9Z148 1263 aaKnown RBP41,35■■■■■ 4,21
Ccm2-201ENSMUST00000000388 Eif4g1Q6NZJ6 1600 aaKnown RBP41,29■■■■■ 4,2
Ccm2-201ENSMUST00000000388 NrkQ9R0G8 1455 aa41,22■■■■■ 4,19
Ccm2-201ENSMUST00000000388 Eif4g3Q80XI3 1579 aaKnown RBP41,2■■■■■ 4,19
Ccm2-201ENSMUST00000000388 Cep162Q6ZQ06 1403 aa41,18■■■■■ 4,18
Ccm2-201ENSMUST00000000388 PtprkP35822 1457 aa41,16■■■■■ 4,18
Ccm2-201ENSMUST00000000388 Samd9lQ69Z37 1561 aa41,15■■■■■ 4,18
Ccm2-201ENSMUST00000000388 Efcab5A0JP43 1406 aa41,15■■■■■ 4,18
Ccm2-201ENSMUST00000000388 Shroom4Q1W617 1475 aa41,1■■■■■ 4,17
Ccm2-201ENSMUST00000000388 Acin1Q9JIX8 1338 aaKnown RBP41,06■■■■■ 4,16
Ccm2-201ENSMUST00000000388 Ift140E9PY46 1464 aa41,02■■■■■ 4,16
Ccm2-201ENSMUST00000000388 Rpgrip1Q9EPQ2 1331 aa41,01■■■■■ 4,16
Ccm2-201ENSMUST00000000388 Disp1Q3TDN0 1521 aa40,91■■■■■ 4,14
Ccm2-201ENSMUST00000000388 Rad54l2Q99NG0 1466 aa40,84■■■■■ 4,13
Ccm2-201ENSMUST00000000388 Arhgap35Q91YM2 1499 aa40,82■■■■■ 4,13
Ccm2-201ENSMUST00000000388 Setd1bQ8CFT2 1985 aa40,82■■■■■ 4,13
Ccm2-201ENSMUST00000000388 Rusc2Q80U22 1514 aa40,77■■■■■ 4,12
Ccm2-201ENSMUST00000000388 Npm2Q80W85 207 aa40,77■■■■■ 4,12
Ccm2-201ENSMUST00000000388 Pbrm1Q8BSQ9 1634 aaKnown RBP40,72■■■■■ 4,11
Ccm2-201ENSMUST00000000388 Magi3Q9EQJ9 1476 aa40,69■■■■■ 4,1
Ccm2-201ENSMUST00000000388 Nup160Q9Z0W3 1402 aaKnown RBP40,69■■■■■ 4,1
Ccm2-201ENSMUST00000000388 SynmQ70IV5 1561 aa40,68■■■■■ 4,1
Ccm2-201ENSMUST00000000388 Map3k1P53349 1493 aa40,66■■■■■ 4,1
Ccm2-201ENSMUST00000000388 Grin2aP35436 1464 aa40,64■■■■■ 4,1
Ccm2-201ENSMUST00000000388 Zeb1Q64318 1117 aa40,62■■■■■ 4,09
Ccm2-201ENSMUST00000000388 Mroh2bQ7M6Y6 1581 aa40,58■■■■■ 4,09
Ccm2-201ENSMUST00000000388 Pla2r1Q62028 1487 aa40,53■■■■■ 4,08
Ccm2-201ENSMUST00000000388 Cc2d2bA0A286YDU8 1405 aa40,51■■■■■ 4,08
Retrieved 100 of 22,080 RNA–protein pairs in 9,9 ms