RNA–Protein interactions for RNA: ENSMUST00000152946.7

Ldb1-206, Transcript of LIM domain-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ldb1, Length 2,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-206ENSMUST00000152946 NischQ80TM9 1593 aa52,05■■■■■ 5,92
Ldb1-206ENSMUST00000152946 Gm35339A0A140LHH9 1649 aa51,88■■■■■ 5,9
Ldb1-206ENSMUST00000152946 Abcc9P70170 1546 aa50,63■■■■■ 5,69
Ldb1-206ENSMUST00000152946 Abcc8B2RUS7 1588 aa49,68■■■■■ 5,54
Ldb1-206ENSMUST00000152946 Rhox8Q6VSS7 320 aa46,96■■■■■ 5,11
Ldb1-206ENSMUST00000152946 ScribQ80U72 1612 aa46,74■■■■■ 5,07
Ldb1-206ENSMUST00000152946 Dcaf1Q80TR8 1506 aa46,4■■■■■ 5,02
Ldb1-206ENSMUST00000152946 Rtl1Q7M732 1744 aa46,36■■■■■ 5,01
Ldb1-206ENSMUST00000152946 Kdm5dQ62240 1548 aa45,66■■■■■ 4,9
Ldb1-206ENSMUST00000152946 Rb1cc1Q9ESK9 1588 aa45,59■■■■■ 4,89
Ldb1-206ENSMUST00000152946 NacadQ5SWP3 1504 aa45,45■■■■■ 4,87
Ldb1-206ENSMUST00000152946 Ccdc180J3QNE4 1664 aa45,43■■■■■ 4,86
Ldb1-206ENSMUST00000152946 Baz1aO88379 1555 aa45,08■■■■■ 4,81
Ldb1-206ENSMUST00000152946 Zcchc6Q5BLK4 1491 aaKnown RBP44,64■■■■■ 4,74
Ldb1-206ENSMUST00000152946 Crybg2B7ZCC2 1516 aa44,5■■■■■ 4,71
Ldb1-206ENSMUST00000152946 Sycp2Q9CUU3 1500 aa44,47■■■■■ 4,71
Ldb1-206ENSMUST00000152946 Smarca2Q6DIC0 1577 aa44,01■■■■■ 4,64
Ldb1-206ENSMUST00000152946 Ccdc136Q3TVA9 1136 aa43,57■■■■■ 4,57
Ldb1-206ENSMUST00000152946 BicraF8VPZ9 1578 aa43,53■■■■■ 4,56
Ldb1-206ENSMUST00000152946 Trim41Q5NCC3 630 aa43■■■■■ 4,47
Ldb1-206ENSMUST00000152946 Cecr2E9Q2Z1 1453 aa42,9■■■■■ 4,46
Ldb1-206ENSMUST00000152946 HrcG5E8J6 738 aa42,86■■■■■ 4,45
Ldb1-206ENSMUST00000152946 Brd4Q9ESU6 1400 aaKnown RBP42,81■■■■■ 4,44
Ldb1-206ENSMUST00000152946 Rpgrip1Q9EPQ2 1331 aa42,63■■■■■ 4,41
Ldb1-206ENSMUST00000152946 Synj1Q8CHC4 1574 aa42,52■■■■■ 4,4
Ldb1-206ENSMUST00000152946 Smarca4Q3TKT4 1613 aaKnown RBP42,44■■■■■ 4,38
Ldb1-206ENSMUST00000152946 Cttnbp2B9EJA2 1648 aa42,33■■■■■ 4,37
Ldb1-206ENSMUST00000152946 CftrP26361 1476 aa42,33■■■■■ 4,37
Ldb1-206ENSMUST00000152946 Golga3P55937 1487 aa42,08■■■■■ 4,33
Ldb1-206ENSMUST00000152946 Cep164Q5DU05 1446 aa41,99■■■■■ 4,31
Ldb1-206ENSMUST00000152946 Iqgap2Q3UQ44 1575 aa41,91■■■■■ 4,3
Ldb1-206ENSMUST00000152946 Atad2bE9Q166 1460 aaKnown RBP41,86■■■■■ 4,29
Ldb1-206ENSMUST00000152946 Top2bQ64511 1612 aa41,86■■■■■ 4,29
Ldb1-206ENSMUST00000152946 Cngb1E1AZ71 1325 aa41,84■■■■■ 4,29
Ldb1-206ENSMUST00000152946 Pds5bQ4VA53 1446 aaKnown RBP41,8■■■■■ 4,28
Ldb1-206ENSMUST00000152946 Rsf1E9PWW9 1441 aaKnown RBP41,66■■■■■ 4,26
Ldb1-206ENSMUST00000152946 Esf1Q3V1V3 845 aaKnown RBP41,65■■■■■ 4,26
Ldb1-206ENSMUST00000152946 Acin1Q9JIX8 1338 aaKnown RBP41,53■■■■■ 4,24
Ldb1-206ENSMUST00000152946 Ccdc88bQ4QRL3 1481 aa41,5■■■■■ 4,23
Ldb1-206ENSMUST00000152946 Chic1Q8CBW7 227 aa41,39■■■■■ 4,22
Ldb1-206ENSMUST00000152946 Cc2d2aQ8CFW7 1633 aa41,39■■■■■ 4,22
Ldb1-206ENSMUST00000152946 Wdr62Q3U3T8 1523 aa41,2■■■■■ 4,19
Ldb1-206ENSMUST00000152946 Fmn1Q05860 1466 aa41,2■■■■■ 4,19
Ldb1-206ENSMUST00000152946 Frmpd1A2AKB4 1549 aa41,09■■■■■ 4,17
Ldb1-206ENSMUST00000152946 Ercc6F8VPZ5 1481 aa41,05■■■■■ 4,16
Ldb1-206ENSMUST00000152946 Top2aQ01320 1528 aaKnown RBP40,88■■■■■ 4,14
Ldb1-206ENSMUST00000152946 TnnQ80Z71 1560 aa40,87■■■■■ 4,13
Ldb1-206ENSMUST00000152946 Unc13aQ4KUS2 1712 aa40,8■■■■■ 4,12
Ldb1-206ENSMUST00000152946 Gab3Q8BSM5 595 aa40,78■■■■■ 4,12
Ldb1-206ENSMUST00000152946 Thoc2B1AZI6 1594 aaKnown RBP40,75■■■■■ 4,11
Ldb1-206ENSMUST00000152946 Lamc3Q9R0B6 1581 aa40,64■■■■■ 4,1
Ldb1-206ENSMUST00000152946 Ehmt2Q9Z148 1263 aaKnown RBP40,6■■■■■ 4,09
Ldb1-206ENSMUST00000152946 Rapgef2Q8CHG7 1496 aa40,5■■■■■ 4,07
Ldb1-206ENSMUST00000152946 Phldb1Q6PDH0 1371 aaKnown RBP40,31■■■■■ 4,04
Ldb1-206ENSMUST00000152946 Kif15Q6P9L6 1387 aa40,31■■■■■ 4,04
Ldb1-206ENSMUST00000152946 Fam135aQ6NS59 1506 aa40,25■■■■■ 4,03
Ldb1-206ENSMUST00000152946 Camsap1A2AHC3 1581 aa40,19■■■■■ 4,02
Ldb1-206ENSMUST00000152946 Cep162Q6ZQ06 1403 aa40,11■■■■■ 4,01
Ldb1-206ENSMUST00000152946 Eif4g1Q6NZJ6 1600 aaKnown RBP40,09■■■■■ 4,01
Ldb1-206ENSMUST00000152946 Ccdc18Q640L5 1455 aa39,99■■■■□ 3,99
Ldb1-206ENSMUST00000152946 Pcgf6Q99NA9 353 aa39,98■■■■□ 3,99
Ldb1-206ENSMUST00000152946 NrkQ9R0G8 1455 aa39,88■■■■□ 3,98
Ldb1-206ENSMUST00000152946 Npm2Q80W85 207 aa39,84■■■■□ 3,97
Ldb1-206ENSMUST00000152946 Shroom4Q1W617 1475 aa39,82■■■■□ 3,97
Ldb1-206ENSMUST00000152946 Cux2P70298 1426 aa39,81■■■■□ 3,96
Ldb1-206ENSMUST00000152946 Ubl4bQ9CQ84 188 aa39,8■■■■□ 3,96
Ldb1-206ENSMUST00000152946 Grin2bQ01097 1482 aa39,79■■■■□ 3,96
Ldb1-206ENSMUST00000152946 PtprkP35822 1457 aa39,77■■■■□ 3,96
Ldb1-206ENSMUST00000152946 Baz1bQ9Z277 1479 aa39,75■■■■□ 3,95
Ldb1-206ENSMUST00000152946 Il27Q8K3I6 234 aa39,74■■■■□ 3,95
Ldb1-206ENSMUST00000152946 Arhgap35Q91YM2 1499 aa39,69■■■■□ 3,94
Ldb1-206ENSMUST00000152946 Map3k1P53349 1493 aa39,59■■■■□ 3,93
Ldb1-206ENSMUST00000152946 Myt1lP97500 1187 aa39,57■■■■□ 3,93
Ldb1-206ENSMUST00000152946 Npm1Q61937 292 aaKnown RBP39,47■■■■□ 3,91
Ldb1-206ENSMUST00000152946 LrpprcQ6PB66 1392 aaKnown RBP39,41■■■■□ 3,9
Ldb1-206ENSMUST00000152946 PogzQ8BZH4 1409 aaKnown RBP39,38■■■■□ 3,89
Ldb1-206ENSMUST00000152946 Mroh2bQ7M6Y6 1581 aa39,37■■■■□ 3,89
Ldb1-206ENSMUST00000152946 Efcab5A0JP43 1406 aa39,36■■■■□ 3,89
Ldb1-206ENSMUST00000152946 Mrc2Q64449 1479 aa39,29■■■■□ 3,88
Ldb1-206ENSMUST00000152946 Clip1Q922J3 1391 aa39,28■■■■□ 3,88
Ldb1-206ENSMUST00000152946 AqrQ8CFQ3 1481 aaKnown RBP39,27■■■■□ 3,88
Ldb1-206ENSMUST00000152946 Duox2A2AQ99 1517 aa39,26■■■■□ 3,88
Ldb1-206ENSMUST00000152946 Eea1Q8BL66 1411 aa39,16■■■■□ 3,86
Ldb1-206ENSMUST00000152946 Kif21aQ9QXL2 1672 aa39,15■■■■□ 3,86
Ldb1-206ENSMUST00000152946 Dhx29Q6PGC1 1365 aaKnown RBP39,12■■■■□ 3,85
Ldb1-206ENSMUST00000152946 Supt5hO55201 1082 aaKnown RBP39,11■■■■□ 3,85
Ldb1-206ENSMUST00000152946 Zeb1Q64318 1117 aa39,08■■■■□ 3,85
Ldb1-206ENSMUST00000152946 Erich3F6QRE9 1637 aa39,08■■■■□ 3,85
Ldb1-206ENSMUST00000152946 Samd9lQ69Z37 1561 aa39,07■■■■□ 3,84
Ldb1-206ENSMUST00000152946 Dnajc5bQ9CQ94 199 aa39,07■■■■□ 3,84
Ldb1-206ENSMUST00000152946 Crocc2F6XLV1 1638 aa39,06■■■■□ 3,84
Ldb1-206ENSMUST00000152946 Arap1Q4LDD4 1452 aa39,04■■■■□ 3,84
Ldb1-206ENSMUST00000152946 SynmQ70IV5 1561 aa39■■■■□ 3,83
Ldb1-206ENSMUST00000152946 Ankrd26Q811D2 1581 aa38,98■■■■□ 3,83
Ldb1-206ENSMUST00000152946 Mier1Q5UAK0 511 aa38,98■■■■□ 3,83
Ldb1-206ENSMUST00000152946 Arhgef5E9Q7D5 1581 aa38,97■■■■□ 3,83
Ldb1-206ENSMUST00000152946 Carmil1Q6EDY6 1374 aa38,96■■■■□ 3,83
Ldb1-206ENSMUST00000152946 Setd5Q5XJV7 1441 aa38,96■■■■□ 3,83
Ldb1-206ENSMUST00000152946 NefmP08553 848 aa38,95■■■■□ 3,83
Ldb1-206ENSMUST00000152946 UbtfP25976 765 aaKnown RBP38,88■■■■□ 3,81
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms