Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SHC4Q6S5L8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SHC4Q6S5L8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SHC4Q6S5L8 AC139426.1-201ENST00000568218 2529 ntBASIC30.29■■■□□ 2.44
SHC4Q6S5L8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.27■■■□□ 2.44
SHC4Q6S5L8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
SHC4Q6S5L8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SHC4Q6S5L8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SHC4Q6S5L8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SHC4Q6S5L8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
SHC4Q6S5L8 AL135925.1-201ENST00000605920 1701 ntBASIC30.25■■■□□ 2.43
SHC4Q6S5L8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
SHC4Q6S5L8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
SHC4Q6S5L8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
SHC4Q6S5L8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SHC4Q6S5L8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.2■■■□□ 2.43
SHC4Q6S5L8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
SHC4Q6S5L8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.19■■■□□ 2.42
SHC4Q6S5L8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SHC4Q6S5L8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
SHC4Q6S5L8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SHC4Q6S5L8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.17■■■□□ 2.42
SHC4Q6S5L8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SHC4Q6S5L8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SHC4Q6S5L8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SHC4Q6S5L8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.15■■■□□ 2.42
SHC4Q6S5L8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
SHC4Q6S5L8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.14■■■□□ 2.42
SHC4Q6S5L8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.14■■■□□ 2.42
SHC4Q6S5L8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SHC4Q6S5L8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.13■■■□□ 2.41
SHC4Q6S5L8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.13■■■□□ 2.41
SHC4Q6S5L8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
SHC4Q6S5L8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SHC4Q6S5L8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
SHC4Q6S5L8 RARRES2P7-201ENST00000567349 469 ntBASIC30.12■■■□□ 2.41
SHC4Q6S5L8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SHC4Q6S5L8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
SHC4Q6S5L8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.11■■■□□ 2.41
SHC4Q6S5L8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SHC4Q6S5L8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SHC4Q6S5L8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SHC4Q6S5L8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SHC4Q6S5L8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SHC4Q6S5L8 SETD8P1-201ENST00000623146 1180 ntBASIC30.08■■■□□ 2.41
SHC4Q6S5L8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
SHC4Q6S5L8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SHC4Q6S5L8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
SHC4Q6S5L8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
SHC4Q6S5L8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.06■■■□□ 2.4
SHC4Q6S5L8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SHC4Q6S5L8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
SHC4Q6S5L8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SHC4Q6S5L8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.05■■■□□ 2.4
SHC4Q6S5L8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SHC4Q6S5L8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
SHC4Q6S5L8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.03■■■□□ 2.4
SHC4Q6S5L8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.02■■■□□ 2.4
SHC4Q6S5L8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SHC4Q6S5L8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SHC4Q6S5L8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SHC4Q6S5L8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SHC4Q6S5L8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SHC4Q6S5L8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SHC4Q6S5L8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SHC4Q6S5L8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.98■■■□□ 2.39
SHC4Q6S5L8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SHC4Q6S5L8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
SHC4Q6S5L8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.98■■■□□ 2.39
SHC4Q6S5L8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SHC4Q6S5L8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.96■■■□□ 2.39
SHC4Q6S5L8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SHC4Q6S5L8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
SHC4Q6S5L8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.93■■■□□ 2.38
SHC4Q6S5L8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
SHC4Q6S5L8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SHC4Q6S5L8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SHC4Q6S5L8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.92■■■□□ 2.38
SHC4Q6S5L8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SHC4Q6S5L8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
SHC4Q6S5L8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
SHC4Q6S5L8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SHC4Q6S5L8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
SHC4Q6S5L8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.88■■■□□ 2.37
SHC4Q6S5L8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SHC4Q6S5L8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SHC4Q6S5L8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.86■■■□□ 2.37
SHC4Q6S5L8 AC136428.2-201ENST00000563187 214 ntBASIC29.86■■■□□ 2.37
SHC4Q6S5L8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SHC4Q6S5L8 CAHM-201ENST00000604200 896 ntBASIC29.85■■■□□ 2.37
SHC4Q6S5L8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
SHC4Q6S5L8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SHC4Q6S5L8 AC010864.1-201ENST00000609407 1511 ntBASIC29.83■■■□□ 2.37
SHC4Q6S5L8 AL391121.1-201ENST00000607967 1349 ntBASIC29.83■■■□□ 2.37
SHC4Q6S5L8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SHC4Q6S5L8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
SHC4Q6S5L8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.82■■■□□ 2.36
SHC4Q6S5L8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SHC4Q6S5L8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SHC4Q6S5L8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.81■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms