Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
DCLRE1AQ6PJP8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
DCLRE1AQ6PJP8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.76■■■□□ 2.19
DCLRE1AQ6PJP8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
DCLRE1AQ6PJP8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.76■■■□□ 2.19
DCLRE1AQ6PJP8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
DCLRE1AQ6PJP8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
DCLRE1AQ6PJP8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.75■■■□□ 2.19
DCLRE1AQ6PJP8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.75■■■□□ 2.19
DCLRE1AQ6PJP8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
DCLRE1AQ6PJP8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
DCLRE1AQ6PJP8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.74■■■□□ 2.19
DCLRE1AQ6PJP8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
DCLRE1AQ6PJP8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.71■■■□□ 2.19
DCLRE1AQ6PJP8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.71■■■□□ 2.19
DCLRE1AQ6PJP8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
DCLRE1AQ6PJP8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
DCLRE1AQ6PJP8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.7■■■□□ 2.18
DCLRE1AQ6PJP8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.7■■■□□ 2.18
DCLRE1AQ6PJP8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
DCLRE1AQ6PJP8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.7■■■□□ 2.18
DCLRE1AQ6PJP8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.69■■■□□ 2.18
DCLRE1AQ6PJP8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
DCLRE1AQ6PJP8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
DCLRE1AQ6PJP8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
DCLRE1AQ6PJP8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.68■■■□□ 2.18
DCLRE1AQ6PJP8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
DCLRE1AQ6PJP8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
DCLRE1AQ6PJP8 AC108673.1-201ENST00000510422 1159 ntBASIC28.66■■■□□ 2.18
DCLRE1AQ6PJP8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
DCLRE1AQ6PJP8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.64■■■□□ 2.18
DCLRE1AQ6PJP8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
DCLRE1AQ6PJP8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.64■■■□□ 2.18
DCLRE1AQ6PJP8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.64■■■□□ 2.18
DCLRE1AQ6PJP8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
DCLRE1AQ6PJP8 DUX4L29-201ENST00000425409 679 ntBASIC28.62■■■□□ 2.17
DCLRE1AQ6PJP8 HLA-V-202ENST00000446817 847 ntBASIC28.62■■■□□ 2.17
DCLRE1AQ6PJP8 ZNRF2P2-203ENST00000454624 420 ntBASIC28.62■■■□□ 2.17
DCLRE1AQ6PJP8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
DCLRE1AQ6PJP8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.61■■■□□ 2.17
DCLRE1AQ6PJP8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.61■■■□□ 2.17
DCLRE1AQ6PJP8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.61■■■□□ 2.17
DCLRE1AQ6PJP8 MIR6090-201ENST00000622481 60 ntBASIC28.61■■■□□ 2.17
DCLRE1AQ6PJP8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
DCLRE1AQ6PJP8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
DCLRE1AQ6PJP8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
DCLRE1AQ6PJP8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
DCLRE1AQ6PJP8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
DCLRE1AQ6PJP8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.58■■■□□ 2.17
DCLRE1AQ6PJP8 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
DCLRE1AQ6PJP8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.55■■■□□ 2.16
DCLRE1AQ6PJP8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.55■■■□□ 2.16
DCLRE1AQ6PJP8 AC021231.2-201ENST00000594613 730 ntBASIC28.55■■■□□ 2.16
DCLRE1AQ6PJP8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
DCLRE1AQ6PJP8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.54■■■□□ 2.16
DCLRE1AQ6PJP8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
DCLRE1AQ6PJP8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
DCLRE1AQ6PJP8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.52■■■□□ 2.16
DCLRE1AQ6PJP8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
DCLRE1AQ6PJP8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.51■■■□□ 2.15
DCLRE1AQ6PJP8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.51■■■□□ 2.15
DCLRE1AQ6PJP8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
DCLRE1AQ6PJP8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
DCLRE1AQ6PJP8 AL161658.1-201ENST00000623641 1967 ntBASIC28.51■■■□□ 2.15
DCLRE1AQ6PJP8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.51■■■□□ 2.15
DCLRE1AQ6PJP8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
DCLRE1AQ6PJP8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
DCLRE1AQ6PJP8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
DCLRE1AQ6PJP8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
DCLRE1AQ6PJP8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
DCLRE1AQ6PJP8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
DCLRE1AQ6PJP8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
DCLRE1AQ6PJP8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
DCLRE1AQ6PJP8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
DCLRE1AQ6PJP8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.46■■■□□ 2.15
DCLRE1AQ6PJP8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
DCLRE1AQ6PJP8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.46■■■□□ 2.15
DCLRE1AQ6PJP8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
DCLRE1AQ6PJP8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
DCLRE1AQ6PJP8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
DCLRE1AQ6PJP8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.45■■■□□ 2.14
DCLRE1AQ6PJP8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
DCLRE1AQ6PJP8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
DCLRE1AQ6PJP8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
DCLRE1AQ6PJP8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
DCLRE1AQ6PJP8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.44■■■□□ 2.14
DCLRE1AQ6PJP8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
DCLRE1AQ6PJP8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
DCLRE1AQ6PJP8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.43■■■□□ 2.14
DCLRE1AQ6PJP8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
DCLRE1AQ6PJP8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
DCLRE1AQ6PJP8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
DCLRE1AQ6PJP8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.41■■■□□ 2.14
DCLRE1AQ6PJP8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
DCLRE1AQ6PJP8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
DCLRE1AQ6PJP8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
DCLRE1AQ6PJP8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.41■■■□□ 2.14
DCLRE1AQ6PJP8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.39■■■□□ 2.14
DCLRE1AQ6PJP8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
DCLRE1AQ6PJP8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms