Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CNKSR3Q6P9H4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.44■■■□□ 2.3
CNKSR3Q6P9H4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CNKSR3Q6P9H4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.43■■■□□ 2.3
CNKSR3Q6P9H4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CNKSR3Q6P9H4 AC016575.1-201ENST00000607026 382 ntBASIC29.43■■■□□ 2.3
CNKSR3Q6P9H4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.43■■■□□ 2.3
CNKSR3Q6P9H4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.42■■■□□ 2.3
CNKSR3Q6P9H4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CNKSR3Q6P9H4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CNKSR3Q6P9H4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CNKSR3Q6P9H4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
CNKSR3Q6P9H4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
CNKSR3Q6P9H4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.4■■■□□ 2.3
CNKSR3Q6P9H4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CNKSR3Q6P9H4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.39■■■□□ 2.3
CNKSR3Q6P9H4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.39■■■□□ 2.3
CNKSR3Q6P9H4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.39■■■□□ 2.3
CNKSR3Q6P9H4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CNKSR3Q6P9H4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.38■■■□□ 2.29
CNKSR3Q6P9H4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CNKSR3Q6P9H4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
CNKSR3Q6P9H4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.37■■■□□ 2.29
CNKSR3Q6P9H4 LINC01971-201ENST00000617888 1048 ntBASIC29.37■■■□□ 2.29
CNKSR3Q6P9H4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.36■■■□□ 2.29
CNKSR3Q6P9H4 DUX4L11-201ENST00000611504 1267 ntBASIC29.36■■■□□ 2.29
CNKSR3Q6P9H4 DUX4L12-201ENST00000614593 1267 ntBASIC29.36■■■□□ 2.29
CNKSR3Q6P9H4 DUX4L14-201ENST00000621227 1267 ntBASIC29.36■■■□□ 2.29
CNKSR3Q6P9H4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CNKSR3Q6P9H4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.35■■■□□ 2.29
CNKSR3Q6P9H4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.33■■■□□ 2.29
CNKSR3Q6P9H4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CNKSR3Q6P9H4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CNKSR3Q6P9H4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CNKSR3Q6P9H4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CNKSR3Q6P9H4 CR559946.2-201ENST00000623684 991 ntBASIC29.32■■■□□ 2.28
CNKSR3Q6P9H4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
CNKSR3Q6P9H4 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CNKSR3Q6P9H4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.3■■■□□ 2.28
CNKSR3Q6P9H4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.29■■■□□ 2.28
CNKSR3Q6P9H4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
CNKSR3Q6P9H4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CNKSR3Q6P9H4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CNKSR3Q6P9H4 HSD17B1P1-201ENST00000590052 955 ntBASIC29.27■■■□□ 2.28
CNKSR3Q6P9H4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CNKSR3Q6P9H4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.27■■■□□ 2.28
CNKSR3Q6P9H4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.25■■■□□ 2.27
CNKSR3Q6P9H4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
CNKSR3Q6P9H4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.25■■■□□ 2.27
CNKSR3Q6P9H4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CNKSR3Q6P9H4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
CNKSR3Q6P9H4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CNKSR3Q6P9H4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CNKSR3Q6P9H4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.21■■■□□ 2.27
CNKSR3Q6P9H4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
CNKSR3Q6P9H4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CNKSR3Q6P9H4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CNKSR3Q6P9H4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CNKSR3Q6P9H4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
CNKSR3Q6P9H4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CNKSR3Q6P9H4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.18■■■□□ 2.26
CNKSR3Q6P9H4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CNKSR3Q6P9H4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CNKSR3Q6P9H4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
CNKSR3Q6P9H4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.15■■■□□ 2.26
CNKSR3Q6P9H4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.15■■■□□ 2.26
CNKSR3Q6P9H4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.15■■■□□ 2.26
CNKSR3Q6P9H4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CNKSR3Q6P9H4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.14■■■□□ 2.25
CNKSR3Q6P9H4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.13■■■□□ 2.25
CNKSR3Q6P9H4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CNKSR3Q6P9H4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.11■■■□□ 2.25
CNKSR3Q6P9H4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CNKSR3Q6P9H4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CNKSR3Q6P9H4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.11■■■□□ 2.25
CNKSR3Q6P9H4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
CNKSR3Q6P9H4 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.1■■■□□ 2.25
CNKSR3Q6P9H4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
CNKSR3Q6P9H4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.08■■■□□ 2.25
CNKSR3Q6P9H4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CNKSR3Q6P9H4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
CNKSR3Q6P9H4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CNKSR3Q6P9H4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CNKSR3Q6P9H4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.05■■■□□ 2.24
CNKSR3Q6P9H4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CNKSR3Q6P9H4 DUX4L13-201ENST00000554103 1267 ntBASIC29.05■■■□□ 2.24
CNKSR3Q6P9H4 DUX4L15-201ENST00000611059 1267 ntBASIC29.05■■■□□ 2.24
CNKSR3Q6P9H4 DUX4L23-201ENST00000615195 1269 ntBASIC29.05■■■□□ 2.24
CNKSR3Q6P9H4 DUX4L24-201ENST00000617576 1269 ntBASIC29.05■■■□□ 2.24
CNKSR3Q6P9H4 DUX4L22-201ENST00000618238 1269 ntBASIC29.05■■■□□ 2.24
CNKSR3Q6P9H4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
CNKSR3Q6P9H4 DUX4L20-201ENST00000619712 1269 ntBASIC29.05■■■□□ 2.24
CNKSR3Q6P9H4 DUX4L21-201ENST00000622058 1269 ntBASIC29.05■■■□□ 2.24
CNKSR3Q6P9H4 DUX4L10-201ENST00000622460 1267 ntBASIC29.05■■■□□ 2.24
CNKSR3Q6P9H4 DUX4L25-201ENST00000624915 1269 ntBASIC29.05■■■□□ 2.24
CNKSR3Q6P9H4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.04■■■□□ 2.24
CNKSR3Q6P9H4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
CNKSR3Q6P9H4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.03■■■□□ 2.24
CNKSR3Q6P9H4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CNKSR3Q6P9H4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms