Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
TRIM60Q495X7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.04■■■□□ 2.4
TRIM60Q495X7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.03■■■□□ 2.4
TRIM60Q495X7 LINC01971-201ENST00000617888 1048 ntBASIC30.03■■■□□ 2.4
TRIM60Q495X7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.03■■■□□ 2.4
TRIM60Q495X7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.02■■■□□ 2.4
TRIM60Q495X7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
TRIM60Q495X7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
TRIM60Q495X7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
TRIM60Q495X7 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.99■■■□□ 2.39
TRIM60Q495X7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
TRIM60Q495X7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
TRIM60Q495X7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.98■■■□□ 2.39
TRIM60Q495X7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
TRIM60Q495X7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
TRIM60Q495X7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
TRIM60Q495X7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.39
TRIM60Q495X7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
TRIM60Q495X7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.95■■■□□ 2.39
TRIM60Q495X7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
TRIM60Q495X7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.94■■■□□ 2.38
TRIM60Q495X7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
TRIM60Q495X7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
TRIM60Q495X7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
TRIM60Q495X7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
TRIM60Q495X7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
TRIM60Q495X7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
TRIM60Q495X7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
TRIM60Q495X7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
TRIM60Q495X7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
TRIM60Q495X7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
TRIM60Q495X7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
TRIM60Q495X7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
TRIM60Q495X7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
TRIM60Q495X7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.86■■■□□ 2.37
TRIM60Q495X7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
TRIM60Q495X7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
TRIM60Q495X7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TRIM60Q495X7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TRIM60Q495X7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
TRIM60Q495X7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
TRIM60Q495X7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.84■■■□□ 2.37
TRIM60Q495X7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
TRIM60Q495X7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
TRIM60Q495X7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.82■■■□□ 2.36
TRIM60Q495X7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.81■■■□□ 2.36
TRIM60Q495X7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TRIM60Q495X7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.79■■■□□ 2.36
TRIM60Q495X7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TRIM60Q495X7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
TRIM60Q495X7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.78■■■□□ 2.36
TRIM60Q495X7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
TRIM60Q495X7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
TRIM60Q495X7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
TRIM60Q495X7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.77■■■□□ 2.36
TRIM60Q495X7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.77■■■□□ 2.36
TRIM60Q495X7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
TRIM60Q495X7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.76■■■□□ 2.35
TRIM60Q495X7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.75■■■□□ 2.35
TRIM60Q495X7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.75■■■□□ 2.35
TRIM60Q495X7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
TRIM60Q495X7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29.74■■■□□ 2.35
TRIM60Q495X7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.73■■■□□ 2.35
TRIM60Q495X7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
TRIM60Q495X7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
TRIM60Q495X7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.7■■■□□ 2.35
TRIM60Q495X7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.7■■■□□ 2.35
TRIM60Q495X7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
TRIM60Q495X7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.69■■■□□ 2.34
TRIM60Q495X7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
TRIM60Q495X7 DUX4L13-201ENST00000554103 1267 ntBASIC29.68■■■□□ 2.34
TRIM60Q495X7 DUX4L15-201ENST00000611059 1267 ntBASIC29.68■■■□□ 2.34
TRIM60Q495X7 DUX4L23-201ENST00000615195 1269 ntBASIC29.68■■■□□ 2.34
TRIM60Q495X7 DUX4L24-201ENST00000617576 1269 ntBASIC29.68■■■□□ 2.34
TRIM60Q495X7 DUX4L22-201ENST00000618238 1269 ntBASIC29.68■■■□□ 2.34
TRIM60Q495X7 DUX4L20-201ENST00000619712 1269 ntBASIC29.68■■■□□ 2.34
TRIM60Q495X7 DUX4L21-201ENST00000622058 1269 ntBASIC29.68■■■□□ 2.34
TRIM60Q495X7 DUX4L10-201ENST00000622460 1267 ntBASIC29.68■■■□□ 2.34
TRIM60Q495X7 DUX4L25-201ENST00000624915 1269 ntBASIC29.68■■■□□ 2.34
TRIM60Q495X7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
TRIM60Q495X7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
TRIM60Q495X7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
TRIM60Q495X7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TRIM60Q495X7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.65■■■□□ 2.34
TRIM60Q495X7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.64■■■□□ 2.34
TRIM60Q495X7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
TRIM60Q495X7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.62■■■□□ 2.33
TRIM60Q495X7 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.62■■■□□ 2.33
TRIM60Q495X7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
TRIM60Q495X7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.62■■■□□ 2.33
TRIM60Q495X7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
TRIM60Q495X7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
TRIM60Q495X7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.6■■■□□ 2.33
TRIM60Q495X7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TRIM60Q495X7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
TRIM60Q495X7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.59■■■□□ 2.33
TRIM60Q495X7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
TRIM60Q495X7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.58■■■□□ 2.33
TRIM60Q495X7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.57■■■□□ 2.32
TRIM60Q495X7 RARRES2P2-201ENST00000394842 485 ntBASIC29.57■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms