Protein–RNA interactions for Protein: Q15276

RABEP1, Rab GTPase-binding effector protein 1, humanhuman

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABEP1Q15276 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
RABEP1Q15276 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
RABEP1Q15276 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
RABEP1Q15276 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
RABEP1Q15276 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
RABEP1Q15276 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
RABEP1Q15276 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
RABEP1Q15276 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
RABEP1Q15276 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
RABEP1Q15276 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.87■■■□□ 2.69
RABEP1Q15276 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.86■■■□□ 2.69
RABEP1Q15276 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
RABEP1Q15276 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.85■■■□□ 2.69
RABEP1Q15276 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.85■■■□□ 2.69
RABEP1Q15276 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
RABEP1Q15276 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.84■■■□□ 2.69
RABEP1Q15276 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
RABEP1Q15276 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
RABEP1Q15276 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
RABEP1Q15276 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
RABEP1Q15276 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
RABEP1Q15276 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
RABEP1Q15276 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
RABEP1Q15276 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
RABEP1Q15276 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
RABEP1Q15276 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.68
RABEP1Q15276 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
RABEP1Q15276 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.75■■■□□ 2.67
RABEP1Q15276 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
RABEP1Q15276 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.74■■■□□ 2.67
RABEP1Q15276 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.74■■■□□ 2.67
RABEP1Q15276 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RABEP1Q15276 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.73■■■□□ 2.67
RABEP1Q15276 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
RABEP1Q15276 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
RABEP1Q15276 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
RABEP1Q15276 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
RABEP1Q15276 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.71■■■□□ 2.67
RABEP1Q15276 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.71■■■□□ 2.67
RABEP1Q15276 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
RABEP1Q15276 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.68■■■□□ 2.66
RABEP1Q15276 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
RABEP1Q15276 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
RABEP1Q15276 WASH5P-204ENST00000632292 975 ntBASIC31.67■■■□□ 2.66
RABEP1Q15276 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
RABEP1Q15276 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
RABEP1Q15276 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
RABEP1Q15276 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
RABEP1Q15276 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.64■■■□□ 2.66
RABEP1Q15276 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
RABEP1Q15276 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
RABEP1Q15276 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
RABEP1Q15276 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
RABEP1Q15276 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RABEP1Q15276 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.61■■■□□ 2.65
RABEP1Q15276 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.61■■■□□ 2.65
RABEP1Q15276 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.61■■■□□ 2.65
RABEP1Q15276 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
RABEP1Q15276 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
RABEP1Q15276 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
RABEP1Q15276 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
RABEP1Q15276 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RABEP1Q15276 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RABEP1Q15276 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.58■■■□□ 2.65
RABEP1Q15276 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
RABEP1Q15276 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RABEP1Q15276 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
RABEP1Q15276 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
RABEP1Q15276 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
RABEP1Q15276 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
RABEP1Q15276 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.56■■■□□ 2.64
RABEP1Q15276 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RABEP1Q15276 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RABEP1Q15276 AL133380.1-201ENST00000506013 324 ntBASIC31.54■■■□□ 2.64
RABEP1Q15276 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.54■■■□□ 2.64
RABEP1Q15276 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
RABEP1Q15276 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
RABEP1Q15276 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
RABEP1Q15276 AC142086.6-201ENST00000621154 1765 ntBASIC31.53■■■□□ 2.64
RABEP1Q15276 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
RABEP1Q15276 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
RABEP1Q15276 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.52■■■□□ 2.64
RABEP1Q15276 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
RABEP1Q15276 AL139393.2-201ENST00000608721 2025 ntBASIC31.51■■■□□ 2.63
RABEP1Q15276 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RABEP1Q15276 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
RABEP1Q15276 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.5■■■□□ 2.63
RABEP1Q15276 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RABEP1Q15276 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RABEP1Q15276 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.49■■■□□ 2.63
RABEP1Q15276 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.49■■■□□ 2.63
RABEP1Q15276 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RABEP1Q15276 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
RABEP1Q15276 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
RABEP1Q15276 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
RABEP1Q15276 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.62
RABEP1Q15276 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
RABEP1Q15276 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.43■■■□□ 2.62
RABEP1Q15276 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.43■■■□□ 2.62
RABEP1Q15276 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms