Protein–RNA interactions for Protein: P62487

POLR2G, DNA-directed RNA polymerase II subunit RPB7, humanhuman

Known RBP eCLIP

Length 172 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2GP62487 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.654e-8■□□□□ 9.1
POLR2GP62487 OVOL2-204ENST00000486776 550 ntTSL 310.83□□□□□ -0.681e-16■□□□□ 9.1
POLR2GP62487 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.737e-6■□□□□ 9.1
POLR2GP62487 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.747e-6■□□□□ 9.1
POLR2GP62487 BRD4-210ENST00000601941 604 ntTSL 510.14□□□□□ -0.797e-6■□□□□ 9.1
POLR2GP62487 SLC2A1-209ENST00000630821 591 ntTSL 210.02□□□□□ -0.814e-8■□□□□ 9.1
POLR2GP62487 SPRED2-205ENST00000440972 555 ntTSL 39.61□□□□□ -0.877e-6■□□□□ 9.1
POLR2GP62487 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.617e-6■□□□□ 9.1
POLR2GP62487 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.667e-6■□□□□ 9.1
POLR2GP62487 SNX5-207ENST00000474883 695 ntTSL 52.89□□□□□ -1.951e-16■□□□□ 9.1
POLR2GP62487 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.1□□□□□ -2.077e-6■□□□□ 9.1
POLR2GP62487 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.99■□□□□ 0.151e-8■□□□□ 9
POLR2GP62487 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC4.95□□□□□ -1.621e-8■□□□□ 9
POLR2GP62487 CTAGE5-203ENST00000341502 4091 ntTSL 1 (best) BASIC9.07□□□□□ -0.961e-6■□□□□ 8.8
POLR2GP62487 CTAGE5-214ENST00000556148 2526 ntTSL 1 (best) BASIC8.88□□□□□ -0.991e-6■□□□□ 8.8
POLR2GP62487 CTAGE5-205ENST00000348007 2762 ntTSL 1 (best) BASIC7.82□□□□□ -1.161e-6■□□□□ 8.8
POLR2GP62487 SPTBN1-203ENST00000389980 2164 ntTSL 1 (best)10.12□□□□□ -0.794e-7■□□□□ 8.8
POLR2GP62487 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.794e-7■□□□□ 8.8
POLR2GP62487 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC7.93□□□□□ -1.144e-7■□□□□ 8.8
POLR2GP62487 APOH-203ENST00000581797 748 ntTSL 35.19□□□□□ -1.586e-6■□□□□ 8.6
POLR2GP62487 APOH-202ENST00000577982 707 ntTSL 52.61□□□□□ -1.996e-6■□□□□ 8.6
POLR2GP62487 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -26e-6■□□□□ 8.6
POLR2GP62487 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.878e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC9.09□□□□□ -0.958e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC9.06□□□□□ -0.968e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-202ENST00000420743 1559 ntTSL 2 BASIC8.87□□□□□ -0.998e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC8.55□□□□□ -1.048e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-225ENST00000556513 1403 ntTSL 5 BASIC8.32□□□□□ -1.088e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-214ENST00000554969 1924 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.18e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.118e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-219ENST00000555309 1714 ntTSL 5 BASIC8.06□□□□□ -1.128e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-232ENST00000557442 1308 ntTSL 28.03□□□□□ -1.128e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-230ENST00000557201 1371 ntTSL 1 (best) BASIC8.01□□□□□ -1.138e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-231ENST00000557336 580 ntTSL 37.81□□□□□ -1.168e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC7.78□□□□□ -1.168e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-213ENST00000554891 644 ntTSL 57.64□□□□□ -1.198e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-208ENST00000553753 1790 ntTSL 5 BASIC7.56□□□□□ -1.28e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-224ENST00000556226 629 ntTSL 57.08□□□□□ -1.288e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-209ENST00000554383 1039 ntTSL 57.04□□□□□ -1.288e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-218ENST00000555215 781 ntTSL 57.04□□□□□ -1.288e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-216ENST00000555137 789 ntTSL 36.89□□□□□ -1.318e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-207ENST00000553614 604 ntTSL 56.11□□□□□ -1.438e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-227ENST00000556897 1252 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.438e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-212ENST00000554539 748 ntTSL 55.69□□□□□ -1.58e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC5.62□□□□□ -1.518e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-233ENST00000557768 599 ntTSL 33.6□□□□□ -1.838e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.888e-7■□□□□ 8.5
POLR2GP62487 HNRNPC-217ENST00000555176 531 ntTSL 53.12□□□□□ -1.918e-7■□□□□ 8.5
POLR2GP62487 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.45■□□□□ 0.383e-11■□□□□ 8.4
POLR2GP62487 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.163e-11■□□□□ 8.4
POLR2GP62487 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.85■□□□□ 0.133e-11■□□□□ 8.4
POLR2GP62487 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)12.39□□□□□ -0.433e-11■□□□□ 8.4
POLR2GP62487 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)8.36□□□□□ -1.073e-11■□□□□ 8.4
POLR2GP62487 PLCB1-224ENST00000636319 2930 ntTSL 516.41■□□□□ 0.221e-8■□□□□ 8.3
POLR2GP62487 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.111e-8■□□□□ 8.3
POLR2GP62487 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.09□□□□□ -0.151e-8■□□□□ 8.3
POLR2GP62487 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.6□□□□□ -0.231e-8■□□□□ 8.3
POLR2GP62487 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.37□□□□□ -0.271e-8■□□□□ 8.3
POLR2GP62487 PLCB1-214ENST00000626161 706 ntTSL 512.84□□□□□ -0.351e-8■□□□□ 8.3
POLR2GP62487 PLCB1-213ENST00000626114 598 ntTSL 57.4□□□□□ -1.221e-8■□□□□ 8.3
POLR2GP62487 PLCB1-221ENST00000635830 3237 ntTSL 57.24□□□□□ -1.251e-8■□□□□ 8.3
POLR2GP62487 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.03□□□□□ -1.281e-8■□□□□ 8.3
POLR2GP62487 PLCB1-212ENST00000625874 3206 ntTSL 26.81□□□□□ -1.321e-8■□□□□ 8.3
POLR2GP62487 PLCB1-227ENST00000636825 3020 ntTSL 56.63□□□□□ -1.351e-8■□□□□ 8.3
POLR2GP62487 PLCB1-219ENST00000630495 759 ntTSL 56.39□□□□□ -1.391e-8■□□□□ 8.3
POLR2GP62487 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.15□□□□□ -1.751e-8■□□□□ 8.3
POLR2GP62487 PLCB1-226ENST00000636784 100 ntTSL 52.85□□□□□ -1.951e-8■□□□□ 8.3
POLR2GP62487 NKD1-202ENST00000564336 477 ntTSL 316.36■□□□□ 0.211e-6■□□□□ 8.2
POLR2GP62487 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.061e-6■□□□□ 8.2
Retrieved 69 of 469 protein–RNA pairs in 22.5 ms