Protein–RNA interactions for Protein: P32319

PEP1, Vacuolar protein sorting/targeting protein VPS10, yeastyeast

Predictions only

Length 1,579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEP1P32319 MEP3YPR138C 1470 nt15.34■□□□□ 0.05
PEP1P32319 SED1YDR077W 1017 nt15.32■□□□□ 0.04
PEP1P32319 GSF2YML048W 1212 nt15.32■□□□□ 0.04
PEP1P32319 LSB5YCL034W 1065 nt15.3■□□□□ 0.04
PEP1P32319 CSM1YCR086W 573 nt15.28■□□□□ 0.04
PEP1P32319 YPL251WYPL251W 303 nt15.27■□□□□ 0.03
PEP1P32319 ACO2YJL200C 2370 nt15.26■□□□□ 0.03
PEP1P32319 YCR025CYCR025C 411 nt15.24■□□□□ 0.03
PEP1P32319 POT1YIL160C 1254 nt15.23■□□□□ 0.03
PEP1P32319 SAM3YPL274W 1764 nt15.21■□□□□ 0.03
PEP1P32319 MHF1YOL086W-A 273 nt15.19■□□□□ 0.02
PEP1P32319 NUC1YJL208C 990 nt15.16■□□□□ 0.02
PEP1P32319 YPR126CYPR126C 309 nt15.16■□□□□ 0.02
PEP1P32319 CTI6YPL181W 1521 nt15.16■□□□□ 0.02
PEP1P32319 LYS20YDL182W 1287 nt15.15■□□□□ 0.02
PEP1P32319 YMR103CYMR103C 363 nt15.14■□□□□ 0.01
PEP1P32319 CDD1YLR245C 429 nt15.11■□□□□ 0.01
PEP1P32319 IGD1YFR017C 588 nt15.1■□□□□ 0.01
PEP1P32319 NIF3YGL221C 867 nt15.1■□□□□ 0.01
PEP1P32319 RIB7YBR153W 735 nt15.1■□□□□ 0.01
PEP1P32319 PRM5YIL117C 957 nt15.09■□□□□ 0.01
PEP1P32319 LIP1YMR298W 453 nt15.09■□□□□ 0.01
PEP1P32319 SSN3YPL042C 1668 nt15.07■□□□□ 0
PEP1P32319 RPT5YOR117W 1305 nt15.07■□□□□ 0
PEP1P32319 BNI5YNL166C 1347 nt15.06■□□□□ 0
PEP1P32319 IRC24YIR036C 792 nt15.05■□□□□ -0
PEP1P32319 tA(AGC)DtA(AGC)D 73 nt15.03■□□□□ -0
PEP1P32319 tA(AGC)FtA(AGC)F 73 nt15.03■□□□□ -0
PEP1P32319 tA(AGC)GtA(AGC)G 73 nt15.03■□□□□ -0
PEP1P32319 tA(AGC)HtA(AGC)H 73 nt15.03■□□□□ -0
PEP1P32319 tA(AGC)JtA(AGC)J 73 nt15.03■□□□□ -0
PEP1P32319 tA(AGC)K1tA(AGC)K1 73 nt15.03■□□□□ -0
PEP1P32319 tA(AGC)K2tA(AGC)K2 73 nt15.03■□□□□ -0
PEP1P32319 tA(AGC)LtA(AGC)L 73 nt15.03■□□□□ -0
PEP1P32319 tA(AGC)M1tA(AGC)M1 73 nt15.03■□□□□ -0
PEP1P32319 tA(AGC)M2tA(AGC)M2 73 nt15.03■□□□□ -0
PEP1P32319 tA(AGC)PtA(AGC)P 73 nt15.03■□□□□ -0
PEP1P32319 SWM1YDR260C 513 nt15.03■□□□□ -0
PEP1P32319 MFG1YDL233W 1377 nt15.01□□□□□ -0.01
PEP1P32319 NAS2YIL007C 663 nt15□□□□□ -0.01
PEP1P32319 HIF1YLL022C 1158 nt15□□□□□ -0.01
PEP1P32319 TPS1YBR126C 1488 nt15□□□□□ -0.01
PEP1P32319 YBL086CYBL086C 1401 nt14.99□□□□□ -0.01
PEP1P32319 TOA2YKL058W 369 nt14.98□□□□□ -0.01
PEP1P32319 IPL1YPL209C 1104 nt14.97□□□□□ -0.01
PEP1P32319 YOR343CYOR343C 327 nt14.96□□□□□ -0.01
PEP1P32319 PAU21YOR394W 495 nt14.96□□□□□ -0.01
PEP1P32319 PAU22YPL282C 495 nt14.96□□□□□ -0.01
PEP1P32319 RPL12BYDR418W 498 nt14.95□□□□□ -0.02
PEP1P32319 HOG1YLR113W 1308 nt14.95□□□□□ -0.02
PEP1P32319 YGR259CYGR259C 441 nt14.94□□□□□ -0.02
PEP1P32319 SAM35YHR083W 990 nt14.94□□□□□ -0.02
PEP1P32319 KAE1YKR038C 1161 nt14.94□□□□□ -0.02
PEP1P32319 BRR1YPR057W 1026 nt14.94□□□□□ -0.02
PEP1P32319 FUR4YBR021W 1902 nt14.93□□□□□ -0.02
PEP1P32319 GND2YGR256W 1479 nt14.93□□□□□ -0.02
PEP1P32319 PAC11YDR488C 1602 nt14.91□□□□□ -0.02
PEP1P32319 DAK2YFL053W 1776 nt14.9□□□□□ -0.02
PEP1P32319 FLX1YIL134W 936 nt14.89□□□□□ -0.03
PEP1P32319 OYE3YPL171C 1203 nt14.87□□□□□ -0.03
PEP1P32319 TGA1tA(UGC)A 73 nt14.86□□□□□ -0.03
PEP1P32319 tA(UGC)EtA(UGC)E 73 nt14.86□□□□□ -0.03
PEP1P32319 tA(UGC)GtA(UGC)G 73 nt14.86□□□□□ -0.03
PEP1P32319 tA(UGC)LtA(UGC)L 73 nt14.86□□□□□ -0.03
PEP1P32319 tA(UGC)OtA(UGC)O 73 nt14.86□□□□□ -0.03
PEP1P32319 YAL016C-AYAL016C-A 315 nt14.86□□□□□ -0.03
PEP1P32319 PHO23YNL097C 993 nt14.86□□□□□ -0.03
PEP1P32319 GRH1YDR517W 1119 nt14.85□□□□□ -0.03
PEP1P32319 OYE2YHR179W 1203 nt14.85□□□□□ -0.03
PEP1P32319 YMR206WYMR206W 942 nt14.85□□□□□ -0.03
PEP1P32319 YOR268CYOR268C 399 nt14.85□□□□□ -0.03
PEP1P32319 DDI1YER143W 1287 nt14.85□□□□□ -0.03
PEP1P32319 PCP1YGR101W 1041 nt14.84□□□□□ -0.03
PEP1P32319 YMR007WYMR007W 381 nt14.84□□□□□ -0.03
PEP1P32319 IML3YBR107C 738 nt14.82□□□□□ -0.04
PEP1P32319 FCY1YPR062W 477 nt14.81□□□□□ -0.04
PEP1P32319 SPE2YOL052C 1191 nt14.81□□□□□ -0.04
PEP1P32319 TOS1YBR162C 1368 nt14.8□□□□□ -0.04
PEP1P32319 HXT1YHR094C 1713 nt14.79□□□□□ -0.04
PEP1P32319 TRT2tT(CGU)K 72 nt14.78□□□□□ -0.04
PEP1P32319 YNL024CYNL024C 741 nt14.77□□□□□ -0.05
PEP1P32319 SAM2YDR502C 1155 nt14.76□□□□□ -0.05
PEP1P32319 MSC1YML128C 1542 nt14.75□□□□□ -0.05
PEP1P32319 YKR005CYKR005C 1578 nt14.74□□□□□ -0.05
PEP1P32319 RAS2YNL098C 969 nt14.73□□□□□ -0.05
PEP1P32319 LEU9YOR108W 1815 nt14.73□□□□□ -0.05
PEP1P32319 DBP1YPL119C 1854 nt14.73□□□□□ -0.05
PEP1P32319 ADH3YMR083W 1128 nt14.72□□□□□ -0.05
PEP1P32319 EAF3YPR023C 1206 nt14.69□□□□□ -0.06
PEP1P32319 RCR1YBR005W 642 nt14.68□□□□□ -0.06
PEP1P32319 PHB2YGR231C 933 nt14.68□□□□□ -0.06
PEP1P32319 HRA1HRA1 564 nt14.67□□□□□ -0.06
PEP1P32319 TMA23YMR269W 636 nt14.67□□□□□ -0.06
PEP1P32319 SER2YGR208W 930 nt14.66□□□□□ -0.06
PEP1P32319 SPS100YHR139C 981 nt14.64□□□□□ -0.07
PEP1P32319 FUB1YCR076C 753 nt14.63□□□□□ -0.07
PEP1P32319 LSM5YER146W 282 nt14.63□□□□□ -0.07
PEP1P32319 MOB1YIL106W 945 nt14.63□□□□□ -0.07
PEP1P32319 YER188WYER188W 720 nt14.61□□□□□ -0.07
PEP1P32319 YFR036W-AYFR036W-A 651 nt14.61□□□□□ -0.07
Retrieved 100 of 7,029 protein–RNA pairs in 34.2 ms