Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ATP6V0CP27449 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ATP6V0CP27449 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
ATP6V0CP27449 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP6V0CP27449 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
ATP6V0CP27449 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP6V0CP27449 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0CP27449 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.4■■□□□ 1.02
ATP6V0CP27449 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ATP6V0CP27449 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP6V0CP27449 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
ATP6V0CP27449 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.37■■□□□ 1.01
ATP6V0CP27449 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
ATP6V0CP27449 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6V0CP27449 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6V0CP27449 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V0CP27449 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
ATP6V0CP27449 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V0CP27449 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V0CP27449 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP6V0CP27449 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.32■■□□□ 1
ATP6V0CP27449 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP6V0CP27449 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP6V0CP27449 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP6V0CP27449 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
ATP6V0CP27449 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP6V0CP27449 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP6V0CP27449 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP6V0CP27449 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATP6V0CP27449 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
ATP6V0CP27449 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
ATP6V0CP27449 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATP6V0CP27449 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP6V0CP27449 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC21.29■■□□□ 1
ATP6V0CP27449 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP6V0CP27449 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATP6V0CP27449 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATP6V0CP27449 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.28■■□□□ 1
ATP6V0CP27449 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.27■■□□□ 1
ATP6V0CP27449 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6V0CP27449 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP6V0CP27449 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.26■□□□□ 0.99
ATP6V0CP27449 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6V0CP27449 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V0CP27449 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V0CP27449 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V0CP27449 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V0CP27449 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ATP6V0CP27449 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V0CP27449 AL121749.1-202ENST00000609313 2153 ntBASIC21.24■□□□□ 0.99
ATP6V0CP27449 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V0CP27449 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP6V0CP27449 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.23■□□□□ 0.99
ATP6V0CP27449 AC135731.1-201ENST00000569415 2548 ntBASIC21.23■□□□□ 0.99
ATP6V0CP27449 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP6V0CP27449 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
ATP6V0CP27449 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP6V0CP27449 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP6V0CP27449 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP6V0CP27449 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.21■□□□□ 0.99
ATP6V0CP27449 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ATP6V0CP27449 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ATP6V0CP27449 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP6V0CP27449 AL135925.1-201ENST00000605920 1701 ntBASIC21.19■□□□□ 0.98
ATP6V0CP27449 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0CP27449 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0CP27449 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6V0CP27449 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
ATP6V0CP27449 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0CP27449 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0CP27449 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0CP27449 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATP6V0CP27449 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V0CP27449 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP6V0CP27449 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ATP6V0CP27449 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V0CP27449 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V0CP27449 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP6V0CP27449 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
ATP6V0CP27449 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP6V0CP27449 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6V0CP27449 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6V0CP27449 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6V0CP27449 DRD5P2-201ENST00000421395 2012 ntBASIC21.12■□□□□ 0.97
ATP6V0CP27449 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6V0CP27449 MVK-208ENST00000539696 608 ntTSL 5 BASIC21.12■□□□□ 0.97
ATP6V0CP27449 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.11■□□□□ 0.97
ATP6V0CP27449 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V0CP27449 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6V0CP27449 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP6V0CP27449 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ATP6V0CP27449 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0CP27449 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0CP27449 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0CP27449 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0CP27449 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0CP27449 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6V0CP27449 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
ATP6V0CP27449 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATP6V0CP27449 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms