Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 MAD2YJL030W 591 nt9.48□□□□□ -0.89
TY1A-PR2P0CX60 IDH1YNL037C 1083 nt9.48□□□□□ -0.89
TY1A-PR2P0CX60 BIO4YNR057C 714 nt9.48□□□□□ -0.89
TY1A-PR2P0CX60 YAP7YOL028C 738 nt9.48□□□□□ -0.89
TY1A-PR2P0CX60 OMA1YKR087C 1038 nt9.47□□□□□ -0.89
TY1A-PR2P0CX60 VPS20YMR077C 666 nt9.47□□□□□ -0.89
TY1A-PR2P0CX60 MRPS8YMR158W 468 nt9.47□□□□□ -0.89
TY1A-PR2P0CX60 TGS1YPL157W 948 nt9.47□□□□□ -0.89
TY1A-PR2P0CX60 ISR1YPR106W 1332 nt9.47□□□□□ -0.89
TY1A-PR2P0CX60 XDJ1YLR090W 1380 nt9.47□□□□□ -0.89
TY1A-PR2P0CX60 CBS1YDL069C 690 nt9.46□□□□□ -0.9
TY1A-PR2P0CX60 NPL3YDR432W 1245 nt9.46□□□□□ -0.9
TY1A-PR2P0CX60 YDR510C-AYDR510C-A 117 nt9.46□□□□□ -0.9
TY1A-PR2P0CX60 HOM6YJR139C 1080 nt9.46□□□□□ -0.9
TY1A-PR2P0CX60 YLR285C-AYLR285C-A 171 nt9.46□□□□□ -0.9
TY1A-PR2P0CX60 ENT5YDR153C 1236 nt9.45□□□□□ -0.9
TY1A-PR2P0CX60 RPF2YKR081C 1035 nt9.45□□□□□ -0.9
TY1A-PR2P0CX60 DSK2YMR276W 1122 nt9.45□□□□□ -0.9
TY1A-PR2P0CX60 POS5YPL188W 1245 nt9.45□□□□□ -0.9
TY1A-PR2P0CX60 LSB5YCL034W 1065 nt9.44□□□□□ -0.9
TY1A-PR2P0CX60 PRP4YPR178W 1398 nt9.44□□□□□ -0.9
TY1A-PR2P0CX60 DPS1YLL018C 1674 nt9.44□□□□□ -0.9
TY1A-PR2P0CX60 SNF1YDR477W 1902 nt9.43□□□□□ -0.9
TY1A-PR2P0CX60 ELO1YJL196C 933 nt9.43□□□□□ -0.9
TY1A-PR2P0CX60 AAC1YMR056C 930 nt9.43□□□□□ -0.9
TY1A-PR2P0CX60 IZH4YOL101C 939 nt9.43□□□□□ -0.9
TY1A-PR2P0CX60 TSR3YOR006C 942 nt9.43□□□□□ -0.9
TY1A-PR2P0CX60 SHE9YDR393W 1371 nt9.42□□□□□ -0.9
TY1A-PR2P0CX60 YEL076C-AYEL076C-A 651 nt9.42□□□□□ -0.9
TY1A-PR2P0CX60 YEL076CYEL076C 651 nt9.42□□□□□ -0.9
TY1A-PR2P0CX60 YLR464WYLR464W 651 nt9.42□□□□□ -0.9
TY1A-PR2P0CX60 PEX25YPL112C 1185 nt9.42□□□□□ -0.9
TY1A-PR2P0CX60 ATG29YPL166W 642 nt9.42□□□□□ -0.9
TY1A-PR2P0CX60 SPR1YOR190W 1338 nt9.41□□□□□ -0.9
TY1A-PR2P0CX60 CLB5YPR120C 1308 nt9.41□□□□□ -0.9
TY1A-PR2P0CX60 ERV41YML067C 1059 nt9.41□□□□□ -0.9
TY1A-PR2P0CX60 YOL038C-AYOL038C-A 96 nt9.41□□□□□ -0.9
TY1A-PR2P0CX60 SIM1YIL123W 1431 nt9.4□□□□□ -0.9
TY1A-PR2P0CX60 CHA1YCL064C 1083 nt9.4□□□□□ -0.9
TY1A-PR2P0CX60 YGR021WYGR021W 873 nt9.4□□□□□ -0.9
TY1A-PR2P0CX60 CSL4YNL232W 879 nt9.4□□□□□ -0.9
TY1A-PR2P0CX60 DCP1YOL149W 696 nt9.4□□□□□ -0.9
TY1A-PR2P0CX60 BTS1YPL069C 1008 nt9.4□□□□□ -0.9
TY1A-PR2P0CX60 RDN25-1RDN25-1 3396 nt9.4□□□□□ -0.9
TY1A-PR2P0CX60 RDN25-2RDN25-2 3396 nt9.4□□□□□ -0.9
TY1A-PR2P0CX60 RMD5YDR255C 1266 nt9.39□□□□□ -0.91
TY1A-PR2P0CX60 EDC1YGL222C 528 nt9.39□□□□□ -0.91
TY1A-PR2P0CX60 GTR1YML121W 933 nt9.39□□□□□ -0.91
TY1A-PR2P0CX60 MRPL24YMR193W 777 nt9.39□□□□□ -0.91
TY1A-PR2P0CX60 YPL068CYPL068C 882 nt9.39□□□□□ -0.91
TY1A-PR2P0CX60 SLM4YBR077C 489 nt9.39□□□□□ -0.91
TY1A-PR2P0CX60 PST2YDR032C 597 nt9.37□□□□□ -0.91
TY1A-PR2P0CX60 PCD1YLR151C 1023 nt9.37□□□□□ -0.91
TY1A-PR2P0CX60 SPG5YMR191W 1122 nt9.37□□□□□ -0.91
TY1A-PR2P0CX60 SSP2YOR242C 1116 nt9.37□□□□□ -0.91
TY1A-PR2P0CX60 YMR075C-AYMR075C-A 366 nt9.36□□□□□ -0.91
TY1A-PR2P0CX60 NCE102YPR149W 522 nt9.36□□□□□ -0.91
TY1A-PR2P0CX60 YCL048W-AYCL048W-A 240 nt9.36□□□□□ -0.91
TY1A-PR2P0CX60 BTT1YDR252W 450 nt9.35□□□□□ -0.91
TY1A-PR2P0CX60 ATG22YCL038C 1587 nt9.35□□□□□ -0.91
TY1A-PR2P0CX60 NPL6YMR091C 1308 nt9.34□□□□□ -0.91
TY1A-PR2P0CX60 CYT2YKL087C 675 nt9.34□□□□□ -0.91
TY1A-PR2P0CX60 CCA1YER168C 1641 nt9.34□□□□□ -0.91
TY1A-PR2P0CX60 BRL1YHR036W 1416 nt9.33□□□□□ -0.92
TY1A-PR2P0CX60 UBC5YDR059C 447 nt9.33□□□□□ -0.92
TY1A-PR2P0CX60 GFD1YMR255W 567 nt9.33□□□□□ -0.92
TY1A-PR2P0CX60 IDP3YNL009W 1263 nt9.33□□□□□ -0.92
TY1A-PR2P0CX60 COS6YGR295C 1146 nt9.32□□□□□ -0.92
TY1A-PR2P0CX60 YIL030W-AYIL030W-A 339 nt9.32□□□□□ -0.92
TY1A-PR2P0CX60 PCM1YEL058W 1674 nt9.32□□□□□ -0.92
TY1A-PR2P0CX60 MNP1YGL068W 585 nt9.31□□□□□ -0.92
TY1A-PR2P0CX60 OAC1YKL120W 975 nt9.31□□□□□ -0.92
TY1A-PR2P0CX60 BMT6YLR063W 1098 nt9.31□□□□□ -0.92
TY1A-PR2P0CX60 RPC53YDL150W 1269 nt9.3□□□□□ -0.92
TY1A-PR2P0CX60 YDR029WYDR029W 315 nt9.3□□□□□ -0.92
TY1A-PR2P0CX60 CMP2YML057W 1815 nt9.3□□□□□ -0.92
TY1A-PR2P0CX60 MED2YDL005C 1296 nt9.29□□□□□ -0.92
TY1A-PR2P0CX60 SEC28YIL076W 891 nt9.29□□□□□ -0.92
TY1A-PR2P0CX60 MOB1YIL106W 945 nt9.29□□□□□ -0.92
TY1A-PR2P0CX60 YJL152WYJL152W 360 nt9.29□□□□□ -0.92
TY1A-PR2P0CX60 AIM2YAL049C 741 nt9.29□□□□□ -0.92
TY1A-PR2P0CX60 RKM5YLR137W 1104 nt9.29□□□□□ -0.92
TY1A-PR2P0CX60 PGC1YPL206C 966 nt9.29□□□□□ -0.92
TY1A-PR2P0CX60 VAC17YCL063W 1272 nt9.28□□□□□ -0.92
TY1A-PR2P0CX60 SCEIQ0160 708 nt9.28□□□□□ -0.92
TY1A-PR2P0CX60 SAW1YAL027W 786 nt9.28□□□□□ -0.92
TY1A-PR2P0CX60 YAL037C-BYAL037C-B 975 nt9.28□□□□□ -0.92
TY1A-PR2P0CX60 SRL2YLR082C 1179 nt9.28□□□□□ -0.92
TY1A-PR2P0CX60 DED1YOR204W 1815 nt9.27□□□□□ -0.93
TY1A-PR2P0CX60 YDR541CYDR541C 1035 nt9.27□□□□□ -0.93
TY1A-PR2P0CX60 POP5YAL033W 522 nt9.27□□□□□ -0.93
TY1A-PR2P0CX60 SDS22YKL193C 1017 nt9.27□□□□□ -0.93
TY1A-PR2P0CX60 END3YNL084C 1050 nt9.27□□□□□ -0.93
TY1A-PR2P0CX60 SLZ1YNL196C 897 nt9.27□□□□□ -0.93
TY1A-PR2P0CX60 YOL079WYOL079W 399 nt9.27□□□□□ -0.93
TY1A-PR2P0CX60 ARL3YPL051W 597 nt9.27□□□□□ -0.93
TY1A-PR2P0CX60 YHR056W-AYHR056W-A 435 nt9.26□□□□□ -0.93
TY1A-PR2P0CX60 ADD66YKL206C 804 nt9.26□□□□□ -0.93
TY1A-PR2P0CX60 NDL1YLR254C 570 nt9.26□□□□□ -0.93
TY1A-PR2P0CX60 YKR005CYKR005C 1578 nt9.25□□□□□ -0.93
Retrieved 100 of 7,029 protein–RNA pairs in 31.6 ms