Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 CWC15YDR163W 528 nt8.82□□□□□ -1
TY2A-LR1P0C2J4 BNI5YNL166C 1347 nt8.8□□□□□ -1
TY2A-LR1P0C2J4 NUC1YJL208C 990 nt8.79□□□□□ -1
TY2A-LR1P0C2J4 BSP1YPR171W 1731 nt8.79□□□□□ -1
TY2A-LR1P0C2J4 CSM1YCR086W 573 nt8.78□□□□□ -1
TY2A-LR1P0C2J4 LSB5YCL034W 1065 nt8.78□□□□□ -1
TY2A-LR1P0C2J4 RPC82YPR190C 1965 nt8.78□□□□□ -1
TY2A-LR1P0C2J4 VRG4YGL225W 1014 nt8.77□□□□□ -1.01
TY2A-LR1P0C2J4 PHO23YNL097C 993 nt8.77□□□□□ -1.01
TY2A-LR1P0C2J4 OXA1YER154W 1209 nt8.76□□□□□ -1.01
TY2A-LR1P0C2J4 RSC8YFR037C 1674 nt8.75□□□□□ -1.01
TY2A-LR1P0C2J4 YJL055WYJL055W 738 nt8.75□□□□□ -1.01
TY2A-LR1P0C2J4 ADH1YOL086C 1047 nt8.75□□□□□ -1.01
TY2A-LR1P0C2J4 MSC1YML128C 1542 nt8.75□□□□□ -1.01
TY2A-LR1P0C2J4 RIB2YOL066C 1776 nt8.74□□□□□ -1.01
TY2A-LR1P0C2J4 YER188WYER188W 720 nt8.74□□□□□ -1.01
TY2A-LR1P0C2J4 YNR029CYNR029C 1290 nt8.74□□□□□ -1.01
TY2A-LR1P0C2J4 SPP2YOR148C 558 nt8.74□□□□□ -1.01
TY2A-LR1P0C2J4 HXT12YIL170W 1374 nt8.73□□□□□ -1.01
TY2A-LR1P0C2J4 SPT20YOL148C 1815 nt8.73□□□□□ -1.01
TY2A-LR1P0C2J4 FLR1YBR008C 1647 nt8.72□□□□□ -1.01
TY2A-LR1P0C2J4 FMS1YMR020W 1527 nt8.72□□□□□ -1.01
TY2A-LR1P0C2J4 DLD2YDL178W 1593 nt8.72□□□□□ -1.01
TY2A-LR1P0C2J4 YDR510C-AYDR510C-A 117 nt8.71□□□□□ -1.02
TY2A-LR1P0C2J4 Q0010Q0010 387 nt8.71□□□□□ -1.02
TY2A-LR1P0C2J4 RPT5YOR117W 1305 nt8.71□□□□□ -1.02
TY2A-LR1P0C2J4 RDN25-1RDN25-1 3396 nt8.7□□□□□ -1.02
TY2A-LR1P0C2J4 RDN25-2RDN25-2 3396 nt8.7□□□□□ -1.02
TY2A-LR1P0C2J4 YPS3YLR121C 1527 nt8.7□□□□□ -1.02
TY2A-LR1P0C2J4 YIL100C-AYIL100C-A 339 nt8.7□□□□□ -1.02
TY2A-LR1P0C2J4 YJL118WYJL118W 660 nt8.7□□□□□ -1.02
TY2A-LR1P0C2J4 YJL195CYJL195C 702 nt8.7□□□□□ -1.02
TY2A-LR1P0C2J4 FUB1YCR076C 753 nt8.69□□□□□ -1.02
TY2A-LR1P0C2J4 RAS2YNL098C 969 nt8.69□□□□□ -1.02
TY2A-LR1P0C2J4 OSH7YHR001W 1314 nt8.67□□□□□ -1.02
TY2A-LR1P0C2J4 HSL7YBR133C 2484 nt8.66□□□□□ -1.02
TY2A-LR1P0C2J4 SAM3YPL274W 1764 nt8.66□□□□□ -1.02
TY2A-LR1P0C2J4 VPS62YGR141W 1404 nt8.65□□□□□ -1.02
TY2A-LR1P0C2J4 OYE2YHR179W 1203 nt8.64□□□□□ -1.03
TY2A-LR1P0C2J4 FUN14YAL008W 597 nt8.64□□□□□ -1.03
TY2A-LR1P0C2J4 RIB7YBR153W 735 nt8.64□□□□□ -1.03
TY2A-LR1P0C2J4 ACH1YBL015W 1581 nt8.63□□□□□ -1.03
TY2A-LR1P0C2J4 ILV3YJR016C 1758 nt8.63□□□□□ -1.03
TY2A-LR1P0C2J4 YJR154WYJR154W 1041 nt8.62□□□□□ -1.03
TY2A-LR1P0C2J4 YOR325WYOR325W 474 nt8.62□□□□□ -1.03
TY2A-LR1P0C2J4 YNL024CYNL024C 741 nt8.61□□□□□ -1.03
TY2A-LR1P0C2J4 TPS1YBR126C 1488 nt8.61□□□□□ -1.03
TY2A-LR1P0C2J4 GAL3YDR009W 1563 nt8.61□□□□□ -1.03
TY2A-LR1P0C2J4 CCT2YIL142W 1584 nt8.61□□□□□ -1.03
TY2A-LR1P0C2J4 YDL086WYDL086W 822 nt8.6□□□□□ -1.03
TY2A-LR1P0C2J4 HEM13YDR044W 987 nt8.6□□□□□ -1.03
TY2A-LR1P0C2J4 OPI10YOL032W 741 nt8.59□□□□□ -1.03
TY2A-LR1P0C2J4 EAF3YPR023C 1206 nt8.59□□□□□ -1.03
TY2A-LR1P0C2J4 SOL2YCR073W-A 948 nt8.58□□□□□ -1.04
TY2A-LR1P0C2J4 YEL008WYEL008W 381 nt8.57□□□□□ -1.04
TY2A-LR1P0C2J4 STE4YOR212W 1272 nt8.57□□□□□ -1.04
TY2A-LR1P0C2J4 MUP1YGR055W 1725 nt8.57□□□□□ -1.04
TY2A-LR1P0C2J4 LSM5YER146W 282 nt8.55□□□□□ -1.04
TY2A-LR1P0C2J4 GPN2YOR262W 1044 nt8.53□□□□□ -1.04
TY2A-LR1P0C2J4 TAT2YOL020W 1779 nt8.53□□□□□ -1.04
TY2A-LR1P0C2J4 HEL2YDR266C 1920 nt8.52□□□□□ -1.04
TY2A-LR1P0C2J4 DDI1YER143W 1287 nt8.52□□□□□ -1.05
TY2A-LR1P0C2J4 ASP3-1YLR155C 1089 nt8.52□□□□□ -1.05
TY2A-LR1P0C2J4 ASP3-2YLR157C 1089 nt8.52□□□□□ -1.05
TY2A-LR1P0C2J4 ASP3-3YLR158C 1089 nt8.52□□□□□ -1.05
TY2A-LR1P0C2J4 ASP3-4YLR160C 1089 nt8.52□□□□□ -1.05
TY2A-LR1P0C2J4 MET8YBR213W 825 nt8.52□□□□□ -1.05
TY2A-LR1P0C2J4 CCT5YJR064W 1689 nt8.52□□□□□ -1.05
TY2A-LR1P0C2J4 MAS1YLR163C 1389 nt8.5□□□□□ -1.05
TY2A-LR1P0C2J4 YLR349WYLR349W 507 nt8.5□□□□□ -1.05
TY2A-LR1P0C2J4 TMA23YMR269W 636 nt8.5□□□□□ -1.05
TY2A-LR1P0C2J4 BET2YPR176C 978 nt8.5□□□□□ -1.05
TY2A-LR1P0C2J4 YDR455CYDR455C 309 nt8.48□□□□□ -1.05
TY2A-LR1P0C2J4 AIM1YAL046C 357 nt8.48□□□□□ -1.05
TY2A-LR1P0C2J4 DIG1YPL049C 1359 nt8.48□□□□□ -1.05
TY2A-LR1P0C2J4 THI72YOR192C 1800 nt8.47□□□□□ -1.05
TY2A-LR1P0C2J4 LSB6YJL100W 1824 nt8.47□□□□□ -1.05
TY2A-LR1P0C2J4 HOL1YNR055C 1761 nt8.46□□□□□ -1.05
TY2A-LR1P0C2J4 ARO8YGL202W 1503 nt8.46□□□□□ -1.05
TY2A-LR1P0C2J4 SNZ1YMR096W 894 nt8.46□□□□□ -1.06
TY2A-LR1P0C2J4 QDR2YIL121W 1629 nt8.46□□□□□ -1.06
TY2A-LR1P0C2J4 ADH7YCR105W 1086 nt8.45□□□□□ -1.06
TY2A-LR1P0C2J4 RAD51YER095W 1203 nt8.45□□□□□ -1.06
TY2A-LR1P0C2J4 CPD1YGR247W 720 nt8.45□□□□□ -1.06
TY2A-LR1P0C2J4 DAK2YFL053W 1776 nt8.45□□□□□ -1.06
TY2A-LR1P0C2J4 COQ8YGL119W 1506 nt8.44□□□□□ -1.06
TY2A-LR1P0C2J4 IMO32YGR031W 1029 nt8.44□□□□□ -1.06
TY2A-LR1P0C2J4 KES1YPL145C 1305 nt8.44□□□□□ -1.06
TY2A-LR1P0C2J4 ERG13YML126C 1476 nt8.44□□□□□ -1.06
TY2A-LR1P0C2J4 YPR126CYPR126C 309 nt8.43□□□□□ -1.06
TY2A-LR1P0C2J4 ENT4YLL038C 744 nt8.42□□□□□ -1.06
TY2A-LR1P0C2J4 TAF13YML098W 504 nt8.42□□□□□ -1.06
TY2A-LR1P0C2J4 ADE8YDR408C 645 nt8.41□□□□□ -1.06
TY2A-LR1P0C2J4 YLR046CYLR046C 813 nt8.41□□□□□ -1.06
TY2A-LR1P0C2J4 MCM5YLR274W 2328 nt8.41□□□□□ -1.06
TY2A-LR1P0C2J4 PAU15YIR041W 375 nt8.4□□□□□ -1.06
TY2A-LR1P0C2J4 RRT8YOL048C 1029 nt8.4□□□□□ -1.06
TY2A-LR1P0C2J4 IML3YBR107C 738 nt8.39□□□□□ -1.07
TY2A-LR1P0C2J4 RIM8YGL045W 1629 nt8.39□□□□□ -1.07
TY2A-LR1P0C2J4 CTI6YPL181W 1521 nt8.39□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms