Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
COL1A2P08123 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.73■■■□□ 2.35
COL1A2P08123 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.73■■■□□ 2.35
COL1A2P08123 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
COL1A2P08123 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
COL1A2P08123 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
COL1A2P08123 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
COL1A2P08123 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
COL1A2P08123 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
COL1A2P08123 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.7■■■□□ 2.35
COL1A2P08123 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.7■■■□□ 2.35
COL1A2P08123 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
COL1A2P08123 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.69■■■□□ 2.34
COL1A2P08123 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.69■■■□□ 2.34
COL1A2P08123 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.69■■■□□ 2.34
COL1A2P08123 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
COL1A2P08123 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
COL1A2P08123 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
COL1A2P08123 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
COL1A2P08123 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL1A2P08123 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.66■■■□□ 2.34
COL1A2P08123 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL1A2P08123 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.65■■■□□ 2.34
COL1A2P08123 AC108673.1-201ENST00000510422 1159 ntBASIC29.64■■■□□ 2.34
COL1A2P08123 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
COL1A2P08123 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
COL1A2P08123 MIR7108-201ENST00000614319 87 ntBASIC29.64■■■□□ 2.33
COL1A2P08123 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
COL1A2P08123 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
COL1A2P08123 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.61■■■□□ 2.33
COL1A2P08123 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.61■■■□□ 2.33
COL1A2P08123 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
COL1A2P08123 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC29.58■■■□□ 2.33
COL1A2P08123 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.58■■■□□ 2.33
COL1A2P08123 DUX4L29-201ENST00000425409 679 ntBASIC29.58■■■□□ 2.33
COL1A2P08123 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
COL1A2P08123 MIR6090-201ENST00000622481 60 ntBASIC29.56■■■□□ 2.32
COL1A2P08123 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.55■■■□□ 2.32
COL1A2P08123 ZNRF2P2-203ENST00000454624 420 ntBASIC29.55■■■□□ 2.32
COL1A2P08123 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.55■■■□□ 2.32
COL1A2P08123 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL1A2P08123 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL1A2P08123 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.54■■■□□ 2.32
COL1A2P08123 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
COL1A2P08123 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
COL1A2P08123 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.52■■■□□ 2.32
COL1A2P08123 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.32
COL1A2P08123 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.51■■■□□ 2.31
COL1A2P08123 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.51■■■□□ 2.31
COL1A2P08123 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.51■■■□□ 2.31
COL1A2P08123 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.5■■■□□ 2.31
COL1A2P08123 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
COL1A2P08123 AC021231.2-201ENST00000594613 730 ntBASIC29.5■■■□□ 2.31
COL1A2P08123 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
COL1A2P08123 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
COL1A2P08123 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
COL1A2P08123 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.48■■■□□ 2.31
COL1A2P08123 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
COL1A2P08123 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
COL1A2P08123 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
COL1A2P08123 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.48■■■□□ 2.31
COL1A2P08123 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
COL1A2P08123 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
COL1A2P08123 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
COL1A2P08123 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
COL1A2P08123 AL161658.1-201ENST00000623641 1967 ntBASIC29.46■■■□□ 2.31
COL1A2P08123 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
COL1A2P08123 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.45■■■□□ 2.31
COL1A2P08123 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
COL1A2P08123 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.44■■■□□ 2.3
COL1A2P08123 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
COL1A2P08123 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
COL1A2P08123 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
COL1A2P08123 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
COL1A2P08123 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
COL1A2P08123 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
COL1A2P08123 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
COL1A2P08123 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
COL1A2P08123 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
COL1A2P08123 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.4■■■□□ 2.3
COL1A2P08123 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.4■■■□□ 2.3
COL1A2P08123 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
COL1A2P08123 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
COL1A2P08123 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
COL1A2P08123 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
COL1A2P08123 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
COL1A2P08123 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
COL1A2P08123 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
COL1A2P08123 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
COL1A2P08123 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
COL1A2P08123 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.37■■■□□ 2.29
COL1A2P08123 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
COL1A2P08123 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
COL1A2P08123 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
COL1A2P08123 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.32■■■□□ 2.28
COL1A2P08123 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.32■■■□□ 2.28
COL1A2P08123 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.32■■■□□ 2.28
COL1A2P08123 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
COL1A2P08123 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
COL1A2P08123 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.3■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms