Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
ALDH1A1P00352 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ALDH1A1P00352 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.49■■■□□ 2.63
ALDH1A1P00352 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
ALDH1A1P00352 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
ALDH1A1P00352 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.48■■■□□ 2.63
ALDH1A1P00352 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ALDH1A1P00352 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC31.47■■■□□ 2.63
ALDH1A1P00352 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.47■■■□□ 2.63
ALDH1A1P00352 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ALDH1A1P00352 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ALDH1A1P00352 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
ALDH1A1P00352 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
ALDH1A1P00352 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
ALDH1A1P00352 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
ALDH1A1P00352 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
ALDH1A1P00352 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ALDH1A1P00352 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
ALDH1A1P00352 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
ALDH1A1P00352 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
ALDH1A1P00352 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.39■■■□□ 2.62
ALDH1A1P00352 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
ALDH1A1P00352 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.38■■■□□ 2.61
ALDH1A1P00352 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.37■■■□□ 2.61
ALDH1A1P00352 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.37■■■□□ 2.61
ALDH1A1P00352 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ALDH1A1P00352 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC31.36■■■□□ 2.61
ALDH1A1P00352 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ALDH1A1P00352 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.34■■■□□ 2.61
ALDH1A1P00352 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ALDH1A1P00352 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ALDH1A1P00352 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ALDH1A1P00352 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ALDH1A1P00352 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
ALDH1A1P00352 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ALDH1A1P00352 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.3■■■□□ 2.6
ALDH1A1P00352 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ALDH1A1P00352 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.29■■■□□ 2.6
ALDH1A1P00352 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.28■■■□□ 2.6
ALDH1A1P00352 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ALDH1A1P00352 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ALDH1A1P00352 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.26■■■□□ 2.59
ALDH1A1P00352 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
ALDH1A1P00352 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC31.25■■■□□ 2.59
ALDH1A1P00352 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.25■■■□□ 2.59
ALDH1A1P00352 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.24■■■□□ 2.59
ALDH1A1P00352 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
ALDH1A1P00352 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ALDH1A1P00352 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
ALDH1A1P00352 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
ALDH1A1P00352 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
ALDH1A1P00352 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ALDH1A1P00352 DUX4L13-201ENST00000554103 1267 ntBASIC31.22■■■□□ 2.59
ALDH1A1P00352 DUX4L15-201ENST00000611059 1267 ntBASIC31.22■■■□□ 2.59
ALDH1A1P00352 DUX4L23-201ENST00000615195 1269 ntBASIC31.22■■■□□ 2.59
ALDH1A1P00352 DUX4L24-201ENST00000617576 1269 ntBASIC31.22■■■□□ 2.59
ALDH1A1P00352 DUX4L22-201ENST00000618238 1269 ntBASIC31.22■■■□□ 2.59
ALDH1A1P00352 DUX4L20-201ENST00000619712 1269 ntBASIC31.22■■■□□ 2.59
ALDH1A1P00352 DUX4L21-201ENST00000622058 1269 ntBASIC31.22■■■□□ 2.59
ALDH1A1P00352 DUX4L10-201ENST00000622460 1267 ntBASIC31.22■■■□□ 2.59
ALDH1A1P00352 DUX4L25-201ENST00000624915 1269 ntBASIC31.22■■■□□ 2.59
ALDH1A1P00352 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ALDH1A1P00352 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
ALDH1A1P00352 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC31.2■■■□□ 2.59
ALDH1A1P00352 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
ALDH1A1P00352 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ALDH1A1P00352 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
ALDH1A1P00352 RARRES2P2-201ENST00000394842 485 ntBASIC31.17■■■□□ 2.58
ALDH1A1P00352 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ALDH1A1P00352 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC31.16■■■□□ 2.58
ALDH1A1P00352 ABHD17AP5-201ENST00000580133 923 ntBASIC31.16■■■□□ 2.58
ALDH1A1P00352 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ALDH1A1P00352 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.14■■■□□ 2.58
ALDH1A1P00352 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.14■■■□□ 2.58
ALDH1A1P00352 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.14■■■□□ 2.58
ALDH1A1P00352 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ALDH1A1P00352 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
ALDH1A1P00352 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.11■■■□□ 2.57
ALDH1A1P00352 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
ALDH1A1P00352 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ALDH1A1P00352 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.1■■■□□ 2.57
ALDH1A1P00352 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
ALDH1A1P00352 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
ALDH1A1P00352 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
ALDH1A1P00352 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.08■■■□□ 2.57
ALDH1A1P00352 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
ALDH1A1P00352 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
ALDH1A1P00352 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
ALDH1A1P00352 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
ALDH1A1P00352 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
ALDH1A1P00352 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.07■■■□□ 2.56
ALDH1A1P00352 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.07■■■□□ 2.56
ALDH1A1P00352 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.04■■■□□ 2.56
ALDH1A1P00352 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
ALDH1A1P00352 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ALDH1A1P00352 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
ALDH1A1P00352 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
ALDH1A1P00352 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
ALDH1A1P00352 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
ALDH1A1P00352 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms