Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNRNP200O75643 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
SNRNP200O75643 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNRNP200O75643 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SNRNP200O75643 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
SNRNP200O75643 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SNRNP200O75643 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.73■■□□□ 1.71
SNRNP200O75643 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SNRNP200O75643 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
SNRNP200O75643 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SNRNP200O75643 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.72■■□□□ 1.71
SNRNP200O75643 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SNRNP200O75643 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.72■■□□□ 1.71
SNRNP200O75643 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SNRNP200O75643 AP006261.1-201ENST00000584783 668 ntBASIC25.72■■□□□ 1.71
SNRNP200O75643 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SNRNP200O75643 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.71■■□□□ 1.71
SNRNP200O75643 AC044849.2-201ENST00000606596 710 ntBASIC25.7■■□□□ 1.71
SNRNP200O75643 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SNRNP200O75643 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SNRNP200O75643 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SNRNP200O75643 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SNRNP200O75643 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SNRNP200O75643 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.68■■□□□ 1.7
SNRNP200O75643 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.68■■□□□ 1.7
SNRNP200O75643 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.68■■□□□ 1.7
SNRNP200O75643 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.67■■□□□ 1.7
SNRNP200O75643 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SNRNP200O75643 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
SNRNP200O75643 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
SNRNP200O75643 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
SNRNP200O75643 AC087741.3-201ENST00000624270 1347 ntBASIC25.66■■□□□ 1.7
SNRNP200O75643 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.65■■□□□ 1.7
SNRNP200O75643 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SNRNP200O75643 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
SNRNP200O75643 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
SNRNP200O75643 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SNRNP200O75643 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SNRNP200O75643 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNRNP200O75643 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNRNP200O75643 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNRNP200O75643 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SNRNP200O75643 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.61■■□□□ 1.69
SNRNP200O75643 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SNRNP200O75643 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SNRNP200O75643 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SNRNP200O75643 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SNRNP200O75643 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SNRNP200O75643 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SNRNP200O75643 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.59■■□□□ 1.69
SNRNP200O75643 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SNRNP200O75643 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SNRNP200O75643 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
SNRNP200O75643 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.58■■□□□ 1.69
SNRNP200O75643 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SNRNP200O75643 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.57■■□□□ 1.68
SNRNP200O75643 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SNRNP200O75643 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SNRNP200O75643 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SNRNP200O75643 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.56■■□□□ 1.68
SNRNP200O75643 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SNRNP200O75643 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SNRNP200O75643 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SNRNP200O75643 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
SNRNP200O75643 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
SNRNP200O75643 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.55■■□□□ 1.68
SNRNP200O75643 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.53■■□□□ 1.68
SNRNP200O75643 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SNRNP200O75643 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
SNRNP200O75643 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.52■■□□□ 1.68
SNRNP200O75643 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.51■■□□□ 1.67
SNRNP200O75643 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.51■■□□□ 1.67
SNRNP200O75643 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNRNP200O75643 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.49■■□□□ 1.67
SNRNP200O75643 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SNRNP200O75643 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNRNP200O75643 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNRNP200O75643 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SNRNP200O75643 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNRNP200O75643 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
SNRNP200O75643 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
SNRNP200O75643 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNRNP200O75643 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SNRNP200O75643 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.47■■□□□ 1.67
SNRNP200O75643 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SNRNP200O75643 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SNRNP200O75643 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNRNP200O75643 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNRNP200O75643 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
SNRNP200O75643 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
SNRNP200O75643 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SNRNP200O75643 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.45■■□□□ 1.66
SNRNP200O75643 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SNRNP200O75643 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.43■■□□□ 1.66
SNRNP200O75643 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
SNRNP200O75643 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SNRNP200O75643 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SNRNP200O75643 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SNRNP200O75643 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SNRNP200O75643 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms