Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
C1QTNF9BB2RNN3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
C1QTNF9BB2RNN3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
C1QTNF9BB2RNN3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
C1QTNF9BB2RNN3 MIR6090-201ENST00000622481 60 ntBASIC25.87■■□□□ 1.73
C1QTNF9BB2RNN3 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
C1QTNF9BB2RNN3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.86■■□□□ 1.73
C1QTNF9BB2RNN3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
C1QTNF9BB2RNN3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.85■■□□□ 1.73
C1QTNF9BB2RNN3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
C1QTNF9BB2RNN3 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
C1QTNF9BB2RNN3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
C1QTNF9BB2RNN3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
C1QTNF9BB2RNN3 AC108673.1-201ENST00000510422 1159 ntBASIC25.83■■□□□ 1.73
C1QTNF9BB2RNN3 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.82■■□□□ 1.72
C1QTNF9BB2RNN3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
C1QTNF9BB2RNN3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
C1QTNF9BB2RNN3 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
C1QTNF9BB2RNN3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.8■■□□□ 1.72
C1QTNF9BB2RNN3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.79■■□□□ 1.72
C1QTNF9BB2RNN3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.79■■□□□ 1.72
C1QTNF9BB2RNN3 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
C1QTNF9BB2RNN3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
C1QTNF9BB2RNN3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
C1QTNF9BB2RNN3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.77■■□□□ 1.72
C1QTNF9BB2RNN3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
C1QTNF9BB2RNN3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.75■■□□□ 1.71
C1QTNF9BB2RNN3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
C1QTNF9BB2RNN3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
C1QTNF9BB2RNN3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
C1QTNF9BB2RNN3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
C1QTNF9BB2RNN3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
C1QTNF9BB2RNN3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.73■■□□□ 1.71
C1QTNF9BB2RNN3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
C1QTNF9BB2RNN3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.72■■□□□ 1.71
C1QTNF9BB2RNN3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
C1QTNF9BB2RNN3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.7■■□□□ 1.7
C1QTNF9BB2RNN3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
C1QTNF9BB2RNN3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.7■■□□□ 1.7
C1QTNF9BB2RNN3 GPX1-201ENST00000419349 1106 ntBASIC25.67■■□□□ 1.7
C1QTNF9BB2RNN3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.67■■□□□ 1.7
C1QTNF9BB2RNN3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.67■■□□□ 1.7
C1QTNF9BB2RNN3 AC012354.3-201ENST00000623734 483 ntBASIC25.67■■□□□ 1.7
C1QTNF9BB2RNN3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
C1QTNF9BB2RNN3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.66■■□□□ 1.7
C1QTNF9BB2RNN3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
C1QTNF9BB2RNN3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
C1QTNF9BB2RNN3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
C1QTNF9BB2RNN3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
C1QTNF9BB2RNN3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
C1QTNF9BB2RNN3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
C1QTNF9BB2RNN3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
C1QTNF9BB2RNN3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
C1QTNF9BB2RNN3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
C1QTNF9BB2RNN3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
C1QTNF9BB2RNN3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
C1QTNF9BB2RNN3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
C1QTNF9BB2RNN3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
C1QTNF9BB2RNN3 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
C1QTNF9BB2RNN3 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.64■■□□□ 1.7
C1QTNF9BB2RNN3 DUX4L13-201ENST00000554103 1267 ntBASIC25.64■■□□□ 1.7
C1QTNF9BB2RNN3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.64■■□□□ 1.7
C1QTNF9BB2RNN3 DUX4L15-201ENST00000611059 1267 ntBASIC25.64■■□□□ 1.7
C1QTNF9BB2RNN3 DUX4L23-201ENST00000615195 1269 ntBASIC25.64■■□□□ 1.7
C1QTNF9BB2RNN3 DUX4L24-201ENST00000617576 1269 ntBASIC25.64■■□□□ 1.7
C1QTNF9BB2RNN3 DUX4L22-201ENST00000618238 1269 ntBASIC25.64■■□□□ 1.7
C1QTNF9BB2RNN3 DUX4L20-201ENST00000619712 1269 ntBASIC25.64■■□□□ 1.7
C1QTNF9BB2RNN3 DUX4L21-201ENST00000622058 1269 ntBASIC25.64■■□□□ 1.7
C1QTNF9BB2RNN3 DUX4L10-201ENST00000622460 1267 ntBASIC25.64■■□□□ 1.7
C1QTNF9BB2RNN3 DUX4L25-201ENST00000624915 1269 ntBASIC25.64■■□□□ 1.7
C1QTNF9BB2RNN3 RNF126P1-201ENST00000567452 1320 ntBASIC25.63■■□□□ 1.69
C1QTNF9BB2RNN3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.63■■□□□ 1.69
C1QTNF9BB2RNN3 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
C1QTNF9BB2RNN3 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
C1QTNF9BB2RNN3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.62■■□□□ 1.69
C1QTNF9BB2RNN3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
C1QTNF9BB2RNN3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
C1QTNF9BB2RNN3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
C1QTNF9BB2RNN3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
C1QTNF9BB2RNN3 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
C1QTNF9BB2RNN3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
C1QTNF9BB2RNN3 NTF6A-201ENST00000591175 560 ntBASIC25.59■■□□□ 1.69
C1QTNF9BB2RNN3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.58■■□□□ 1.69
C1QTNF9BB2RNN3 AC018358.1-201ENST00000631079 1402 ntBASIC25.56■■□□□ 1.68
C1QTNF9BB2RNN3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
C1QTNF9BB2RNN3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
C1QTNF9BB2RNN3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
C1QTNF9BB2RNN3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
C1QTNF9BB2RNN3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
C1QTNF9BB2RNN3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
C1QTNF9BB2RNN3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
C1QTNF9BB2RNN3 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
C1QTNF9BB2RNN3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
C1QTNF9BB2RNN3 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
C1QTNF9BB2RNN3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
C1QTNF9BB2RNN3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.52■■□□□ 1.68
C1QTNF9BB2RNN3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
C1QTNF9BB2RNN3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.52■■□□□ 1.68
C1QTNF9BB2RNN3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
C1QTNF9BB2RNN3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms