Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CGB1A6NKQ9 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CGB1A6NKQ9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CGB1A6NKQ9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
CGB1A6NKQ9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.27■■□□□ 1
CGB1A6NKQ9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CGB1A6NKQ9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CGB1A6NKQ9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CGB1A6NKQ9 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CGB1A6NKQ9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.24■□□□□ 0.99
CGB1A6NKQ9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CGB1A6NKQ9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CGB1A6NKQ9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CGB1A6NKQ9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CGB1A6NKQ9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CGB1A6NKQ9 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CGB1A6NKQ9 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CGB1A6NKQ9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CGB1A6NKQ9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CGB1A6NKQ9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
CGB1A6NKQ9 AL135925.1-201ENST00000605920 1701 ntBASIC21.21■□□□□ 0.99
CGB1A6NKQ9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CGB1A6NKQ9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CGB1A6NKQ9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CGB1A6NKQ9 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CGB1A6NKQ9 AC139426.1-201ENST00000568218 2529 ntBASIC21.18■□□□□ 0.98
CGB1A6NKQ9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CGB1A6NKQ9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CGB1A6NKQ9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.18■□□□□ 0.98
CGB1A6NKQ9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.17■□□□□ 0.98
CGB1A6NKQ9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CGB1A6NKQ9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CGB1A6NKQ9 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CGB1A6NKQ9 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CGB1A6NKQ9 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.16■□□□□ 0.98
CGB1A6NKQ9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CGB1A6NKQ9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CGB1A6NKQ9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.15■□□□□ 0.98
CGB1A6NKQ9 RARRES2P7-201ENST00000567349 469 ntBASIC21.14■□□□□ 0.97
CGB1A6NKQ9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CGB1A6NKQ9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CGB1A6NKQ9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CGB1A6NKQ9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CGB1A6NKQ9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CGB1A6NKQ9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CGB1A6NKQ9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CGB1A6NKQ9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CGB1A6NKQ9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.11■□□□□ 0.97
CGB1A6NKQ9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CGB1A6NKQ9 SETD8P1-201ENST00000623146 1180 ntBASIC21.11■□□□□ 0.97
CGB1A6NKQ9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CGB1A6NKQ9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CGB1A6NKQ9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
CGB1A6NKQ9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CGB1A6NKQ9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.1■□□□□ 0.97
CGB1A6NKQ9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CGB1A6NKQ9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CGB1A6NKQ9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CGB1A6NKQ9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CGB1A6NKQ9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CGB1A6NKQ9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.08■□□□□ 0.97
CGB1A6NKQ9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CGB1A6NKQ9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CGB1A6NKQ9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CGB1A6NKQ9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CGB1A6NKQ9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CGB1A6NKQ9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.06■□□□□ 0.96
CGB1A6NKQ9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CGB1A6NKQ9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CGB1A6NKQ9 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CGB1A6NKQ9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CGB1A6NKQ9 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.04■□□□□ 0.96
CGB1A6NKQ9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CGB1A6NKQ9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CGB1A6NKQ9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CGB1A6NKQ9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.04■□□□□ 0.96
CGB1A6NKQ9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CGB1A6NKQ9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CGB1A6NKQ9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.02■□□□□ 0.96
CGB1A6NKQ9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CGB1A6NKQ9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.02■□□□□ 0.95
CGB1A6NKQ9 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGB1A6NKQ9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.01■□□□□ 0.95
CGB1A6NKQ9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CGB1A6NKQ9 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGB1A6NKQ9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21■□□□□ 0.95
CGB1A6NKQ9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21■□□□□ 0.95
CGB1A6NKQ9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21■□□□□ 0.95
CGB1A6NKQ9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CGB1A6NKQ9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGB1A6NKQ9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CGB1A6NKQ9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.98■□□□□ 0.95
CGB1A6NKQ9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGB1A6NKQ9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CGB1A6NKQ9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGB1A6NKQ9 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CGB1A6NKQ9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CGB1A6NKQ9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CGB1A6NKQ9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CGB1A6NKQ9 AC136428.2-201ENST00000563187 214 ntBASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms