Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TBC1D3FA6NER0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.8■■□□□ 1.88
TBC1D3FA6NER0 ZNRF2P2-203ENST00000454624 420 ntBASIC26.79■■□□□ 1.88
TBC1D3FA6NER0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.79■■□□□ 1.88
TBC1D3FA6NER0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TBC1D3FA6NER0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TBC1D3FA6NER0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.78■■□□□ 1.88
TBC1D3FA6NER0 DUX4L29-201ENST00000425409 679 ntBASIC26.77■■□□□ 1.88
TBC1D3FA6NER0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.77■■□□□ 1.88
TBC1D3FA6NER0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.76■■□□□ 1.88
TBC1D3FA6NER0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TBC1D3FA6NER0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
TBC1D3FA6NER0 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.76■■□□□ 1.87
TBC1D3FA6NER0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TBC1D3FA6NER0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.75■■□□□ 1.87
TBC1D3FA6NER0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TBC1D3FA6NER0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TBC1D3FA6NER0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.74■■□□□ 1.87
TBC1D3FA6NER0 AC108673.1-201ENST00000510422 1159 ntBASIC26.74■■□□□ 1.87
TBC1D3FA6NER0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TBC1D3FA6NER0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TBC1D3FA6NER0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
TBC1D3FA6NER0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
TBC1D3FA6NER0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.72■■□□□ 1.87
TBC1D3FA6NER0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TBC1D3FA6NER0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TBC1D3FA6NER0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.71■■□□□ 1.87
TBC1D3FA6NER0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
TBC1D3FA6NER0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
TBC1D3FA6NER0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TBC1D3FA6NER0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.68■■□□□ 1.86
TBC1D3FA6NER0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TBC1D3FA6NER0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
TBC1D3FA6NER0 MIR6090-201ENST00000622481 60 ntBASIC26.68■■□□□ 1.86
TBC1D3FA6NER0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
TBC1D3FA6NER0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.66■■□□□ 1.86
TBC1D3FA6NER0 AC021231.2-201ENST00000594613 730 ntBASIC26.66■■□□□ 1.86
TBC1D3FA6NER0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TBC1D3FA6NER0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.65■■□□□ 1.86
TBC1D3FA6NER0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
TBC1D3FA6NER0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TBC1D3FA6NER0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TBC1D3FA6NER0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
TBC1D3FA6NER0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.63■■□□□ 1.85
TBC1D3FA6NER0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TBC1D3FA6NER0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
TBC1D3FA6NER0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TBC1D3FA6NER0 HLA-V-202ENST00000446817 847 ntBASIC26.62■■□□□ 1.85
TBC1D3FA6NER0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TBC1D3FA6NER0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TBC1D3FA6NER0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TBC1D3FA6NER0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TBC1D3FA6NER0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.6■■□□□ 1.85
TBC1D3FA6NER0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.6■■□□□ 1.85
TBC1D3FA6NER0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TBC1D3FA6NER0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
TBC1D3FA6NER0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
TBC1D3FA6NER0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TBC1D3FA6NER0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.58■■□□□ 1.85
TBC1D3FA6NER0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TBC1D3FA6NER0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.56■■□□□ 1.84
TBC1D3FA6NER0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TBC1D3FA6NER0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TBC1D3FA6NER0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
TBC1D3FA6NER0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
TBC1D3FA6NER0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.54■■□□□ 1.84
TBC1D3FA6NER0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
TBC1D3FA6NER0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TBC1D3FA6NER0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
TBC1D3FA6NER0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.52■■□□□ 1.84
TBC1D3FA6NER0 AL161658.1-201ENST00000623641 1967 ntBASIC26.51■■□□□ 1.83
TBC1D3FA6NER0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
TBC1D3FA6NER0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TBC1D3FA6NER0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TBC1D3FA6NER0 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TBC1D3FA6NER0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TBC1D3FA6NER0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
TBC1D3FA6NER0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
TBC1D3FA6NER0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TBC1D3FA6NER0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TBC1D3FA6NER0 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
TBC1D3FA6NER0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
TBC1D3FA6NER0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.47■■□□□ 1.83
TBC1D3FA6NER0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
TBC1D3FA6NER0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
TBC1D3FA6NER0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TBC1D3FA6NER0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.45■■□□□ 1.82
TBC1D3FA6NER0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.45■■□□□ 1.82
TBC1D3FA6NER0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.45■■□□□ 1.82
TBC1D3FA6NER0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
TBC1D3FA6NER0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TBC1D3FA6NER0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.44■■□□□ 1.82
TBC1D3FA6NER0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TBC1D3FA6NER0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TBC1D3FA6NER0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.44■■□□□ 1.82
TBC1D3FA6NER0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TBC1D3FA6NER0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TBC1D3FA6NER0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TBC1D3FA6NER0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TBC1D3FA6NER0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms