Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
TCRBV9S1A1TA0A576 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TCRBV9S1A1TA0A576 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TCRBV9S1A1TA0A576 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TCRBV9S1A1TA0A576 AL135925.1-201ENST00000605920 1701 ntBASIC26.93■■□□□ 1.9
TCRBV9S1A1TA0A576 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TCRBV9S1A1TA0A576 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
TCRBV9S1A1TA0A576 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
TCRBV9S1A1TA0A576 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TCRBV9S1A1TA0A576 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TCRBV9S1A1TA0A576 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
TCRBV9S1A1TA0A576 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.89■■□□□ 1.89
TCRBV9S1A1TA0A576 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
TCRBV9S1A1TA0A576 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
TCRBV9S1A1TA0A576 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
TCRBV9S1A1TA0A576 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
TCRBV9S1A1TA0A576 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TCRBV9S1A1TA0A576 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TCRBV9S1A1TA0A576 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TCRBV9S1A1TA0A576 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
TCRBV9S1A1TA0A576 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.84■■□□□ 1.89
TCRBV9S1A1TA0A576 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.84■■□□□ 1.89
TCRBV9S1A1TA0A576 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
TCRBV9S1A1TA0A576 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TCRBV9S1A1TA0A576 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.83■■□□□ 1.89
TCRBV9S1A1TA0A576 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.83■■□□□ 1.89
TCRBV9S1A1TA0A576 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TCRBV9S1A1TA0A576 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
TCRBV9S1A1TA0A576 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.82■■□□□ 1.88
TCRBV9S1A1TA0A576 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.82■■□□□ 1.88
TCRBV9S1A1TA0A576 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TCRBV9S1A1TA0A576 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TCRBV9S1A1TA0A576 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TCRBV9S1A1TA0A576 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.79■■□□□ 1.88
TCRBV9S1A1TA0A576 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
TCRBV9S1A1TA0A576 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.76■■□□□ 1.87
TCRBV9S1A1TA0A576 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
TCRBV9S1A1TA0A576 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
TCRBV9S1A1TA0A576 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
TCRBV9S1A1TA0A576 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TCRBV9S1A1TA0A576 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TCRBV9S1A1TA0A576 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TCRBV9S1A1TA0A576 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TCRBV9S1A1TA0A576 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
TCRBV9S1A1TA0A576 WASH5P-204ENST00000632292 975 ntBASIC26.73■■□□□ 1.87
TCRBV9S1A1TA0A576 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TCRBV9S1A1TA0A576 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TCRBV9S1A1TA0A576 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TCRBV9S1A1TA0A576 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
TCRBV9S1A1TA0A576 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.72■■□□□ 1.87
TCRBV9S1A1TA0A576 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TCRBV9S1A1TA0A576 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
TCRBV9S1A1TA0A576 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.7■■□□□ 1.86
TCRBV9S1A1TA0A576 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
TCRBV9S1A1TA0A576 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TCRBV9S1A1TA0A576 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TCRBV9S1A1TA0A576 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TCRBV9S1A1TA0A576 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
TCRBV9S1A1TA0A576 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.67■■□□□ 1.86
TCRBV9S1A1TA0A576 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TCRBV9S1A1TA0A576 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TCRBV9S1A1TA0A576 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.66■■□□□ 1.86
TCRBV9S1A1TA0A576 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
TCRBV9S1A1TA0A576 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TCRBV9S1A1TA0A576 AL133380.1-201ENST00000506013 324 ntBASIC26.65■■□□□ 1.86
TCRBV9S1A1TA0A576 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TCRBV9S1A1TA0A576 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TCRBV9S1A1TA0A576 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
TCRBV9S1A1TA0A576 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TCRBV9S1A1TA0A576 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TCRBV9S1A1TA0A576 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TCRBV9S1A1TA0A576 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TCRBV9S1A1TA0A576 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.62■■□□□ 1.85
TCRBV9S1A1TA0A576 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TCRBV9S1A1TA0A576 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.62■■□□□ 1.85
TCRBV9S1A1TA0A576 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.61■■□□□ 1.85
TCRBV9S1A1TA0A576 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TCRBV9S1A1TA0A576 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TCRBV9S1A1TA0A576 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TCRBV9S1A1TA0A576 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TCRBV9S1A1TA0A576 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
TCRBV9S1A1TA0A576 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TCRBV9S1A1TA0A576 AL139393.2-201ENST00000608721 2025 ntBASIC26.58■■□□□ 1.85
TCRBV9S1A1TA0A576 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.58■■□□□ 1.85
TCRBV9S1A1TA0A576 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
TCRBV9S1A1TA0A576 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.57■■□□□ 1.84
TCRBV9S1A1TA0A576 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TCRBV9S1A1TA0A576 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TCRBV9S1A1TA0A576 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.55■■□□□ 1.84
TCRBV9S1A1TA0A576 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
TCRBV9S1A1TA0A576 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TCRBV9S1A1TA0A576 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TCRBV9S1A1TA0A576 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TCRBV9S1A1TA0A576 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.54■■□□□ 1.84
TCRBV9S1A1TA0A576 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TCRBV9S1A1TA0A576 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TCRBV9S1A1TA0A576 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
TCRBV9S1A1TA0A576 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TCRBV9S1A1TA0A576 AC142086.6-201ENST00000621154 1765 ntBASIC26.53■■□□□ 1.84
TCRBV9S1A1TA0A576 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms