Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV30A0A087WSZ9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV30A0A087WSZ9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV30A0A087WSZ9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.77■□□□□ 0.92
TRAV30A0A087WSZ9 WASH5P-204ENST00000632292 975 ntBASIC20.77■□□□□ 0.92
TRAV30A0A087WSZ9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAV30A0A087WSZ9 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV30A0A087WSZ9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAV30A0A087WSZ9 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV30A0A087WSZ9 ST7-AS1-201ENST00000456775 1889 ntBASIC20.75■□□□□ 0.91
TRAV30A0A087WSZ9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV30A0A087WSZ9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV30A0A087WSZ9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV30A0A087WSZ9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV30A0A087WSZ9 ABCB10P3-201ENST00000561950 2166 ntBASIC20.73■□□□□ 0.91
TRAV30A0A087WSZ9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAV30A0A087WSZ9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV30A0A087WSZ9 AL133380.1-201ENST00000506013 324 ntBASIC20.73■□□□□ 0.91
TRAV30A0A087WSZ9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV30A0A087WSZ9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV30A0A087WSZ9 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV30A0A087WSZ9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV30A0A087WSZ9 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV30A0A087WSZ9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAV30A0A087WSZ9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV30A0A087WSZ9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV30A0A087WSZ9 AL135925.1-201ENST00000605920 1701 ntBASIC20.7■□□□□ 0.9
TRAV30A0A087WSZ9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV30A0A087WSZ9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV30A0A087WSZ9 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV30A0A087WSZ9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAV30A0A087WSZ9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRAV30A0A087WSZ9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TRAV30A0A087WSZ9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.66■□□□□ 0.9
TRAV30A0A087WSZ9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV30A0A087WSZ9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV30A0A087WSZ9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRAV30A0A087WSZ9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV30A0A087WSZ9 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAV30A0A087WSZ9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV30A0A087WSZ9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TRAV30A0A087WSZ9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV30A0A087WSZ9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.63■□□□□ 0.89
TRAV30A0A087WSZ9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV30A0A087WSZ9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV30A0A087WSZ9 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TRAV30A0A087WSZ9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV30A0A087WSZ9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV30A0A087WSZ9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV30A0A087WSZ9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.62■□□□□ 0.89
TRAV30A0A087WSZ9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV30A0A087WSZ9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
TRAV30A0A087WSZ9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.61■□□□□ 0.89
TRAV30A0A087WSZ9 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV30A0A087WSZ9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV30A0A087WSZ9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV30A0A087WSZ9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV30A0A087WSZ9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TRAV30A0A087WSZ9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TRAV30A0A087WSZ9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV30A0A087WSZ9 RARRES2P7-201ENST00000567349 469 ntBASIC20.59■□□□□ 0.89
TRAV30A0A087WSZ9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV30A0A087WSZ9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV30A0A087WSZ9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV30A0A087WSZ9 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV30A0A087WSZ9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TRAV30A0A087WSZ9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TRAV30A0A087WSZ9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV30A0A087WSZ9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV30A0A087WSZ9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV30A0A087WSZ9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV30A0A087WSZ9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRAV30A0A087WSZ9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV30A0A087WSZ9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV30A0A087WSZ9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
TRAV30A0A087WSZ9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TRAV30A0A087WSZ9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV30A0A087WSZ9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV30A0A087WSZ9 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV30A0A087WSZ9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAV30A0A087WSZ9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV30A0A087WSZ9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV30A0A087WSZ9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TRAV30A0A087WSZ9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TRAV30A0A087WSZ9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV30A0A087WSZ9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.53■□□□□ 0.88
TRAV30A0A087WSZ9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRAV30A0A087WSZ9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV30A0A087WSZ9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV30A0A087WSZ9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.52■□□□□ 0.88
TRAV30A0A087WSZ9 SETD8P1-201ENST00000623146 1180 ntBASIC20.52■□□□□ 0.88
TRAV30A0A087WSZ9 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV30A0A087WSZ9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
TRAV30A0A087WSZ9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV30A0A087WSZ9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV30A0A087WSZ9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV30A0A087WSZ9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV30A0A087WSZ9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV30A0A087WSZ9 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV30A0A087WSZ9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms