Protein–RNA interactions for Protein: Q9Y678

COPG1, Coatomer subunit gamma-1, humanhuman

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1Q9Y678 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.62■□□□□ 0.89
COPG1Q9Y678 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.62■□□□□ 0.89
COPG1Q9Y678 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.62■□□□□ 0.89
COPG1Q9Y678 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPG1Q9Y678 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
COPG1Q9Y678 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPG1Q9Y678 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPG1Q9Y678 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
COPG1Q9Y678 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COPG1Q9Y678 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
COPG1Q9Y678 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPG1Q9Y678 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.62■□□□□ 0.89
COPG1Q9Y678 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COPG1Q9Y678 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPG1Q9Y678 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPG1Q9Y678 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPG1Q9Y678 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPG1Q9Y678 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPG1Q9Y678 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPG1Q9Y678 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPG1Q9Y678 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPG1Q9Y678 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COPG1Q9Y678 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
COPG1Q9Y678 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPG1Q9Y678 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPG1Q9Y678 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.61■□□□□ 0.89
COPG1Q9Y678 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.61■□□□□ 0.89
COPG1Q9Y678 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.61■□□□□ 0.89
COPG1Q9Y678 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPG1Q9Y678 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPG1Q9Y678 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPG1Q9Y678 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COPG1Q9Y678 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COPG1Q9Y678 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.6■□□□□ 0.89
COPG1Q9Y678 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COPG1Q9Y678 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
COPG1Q9Y678 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.6■□□□□ 0.89
COPG1Q9Y678 AC034268.1-201ENST00000441047 882 ntBASIC20.6■□□□□ 0.89
COPG1Q9Y678 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.6■□□□□ 0.89
COPG1Q9Y678 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COPG1Q9Y678 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COPG1Q9Y678 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.6■□□□□ 0.89
COPG1Q9Y678 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
COPG1Q9Y678 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.6■□□□□ 0.89
COPG1Q9Y678 LINC01006-201ENST00000333319 2292 ntBASIC20.6■□□□□ 0.89
COPG1Q9Y678 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
COPG1Q9Y678 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COPG1Q9Y678 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COPG1Q9Y678 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.59■□□□□ 0.89
COPG1Q9Y678 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COPG1Q9Y678 AC133637.1-201ENST00000624115 1537 ntBASIC20.59■□□□□ 0.89
COPG1Q9Y678 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COPG1Q9Y678 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COPG1Q9Y678 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.59■□□□□ 0.89
COPG1Q9Y678 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.59■□□□□ 0.89
COPG1Q9Y678 AC126544.1-201ENST00000580842 1059 ntBASIC20.59■□□□□ 0.89
COPG1Q9Y678 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.59■□□□□ 0.89
COPG1Q9Y678 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.59■□□□□ 0.89
COPG1Q9Y678 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.59■□□□□ 0.89
COPG1Q9Y678 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.59■□□□□ 0.89
COPG1Q9Y678 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
COPG1Q9Y678 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COPG1Q9Y678 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
COPG1Q9Y678 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COPG1Q9Y678 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.58■□□□□ 0.89
COPG1Q9Y678 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COPG1Q9Y678 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COPG1Q9Y678 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COPG1Q9Y678 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
COPG1Q9Y678 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.58■□□□□ 0.89
COPG1Q9Y678 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.58■□□□□ 0.89
COPG1Q9Y678 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COPG1Q9Y678 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COPG1Q9Y678 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
COPG1Q9Y678 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COPG1Q9Y678 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
COPG1Q9Y678 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.88
COPG1Q9Y678 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COPG1Q9Y678 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COPG1Q9Y678 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.57■□□□□ 0.88
COPG1Q9Y678 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
COPG1Q9Y678 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
COPG1Q9Y678 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.57■□□□□ 0.88
COPG1Q9Y678 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COPG1Q9Y678 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.57■□□□□ 0.88
COPG1Q9Y678 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.57■□□□□ 0.88
COPG1Q9Y678 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.57■□□□□ 0.88
COPG1Q9Y678 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COPG1Q9Y678 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.57■□□□□ 0.88
COPG1Q9Y678 OXCT2P1-201ENST00000447263 1535 ntBASIC20.57■□□□□ 0.88
COPG1Q9Y678 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.57■□□□□ 0.88
COPG1Q9Y678 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPG1Q9Y678 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.56■□□□□ 0.88
COPG1Q9Y678 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COPG1Q9Y678 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.56■□□□□ 0.88
COPG1Q9Y678 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPG1Q9Y678 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPG1Q9Y678 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPG1Q9Y678 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPG1Q9Y678 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms