Protein–RNA interactions for Protein: Q9Y620

RAD54B, DNA repair and recombination protein RAD54B, humanhuman

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD54BQ9Y620 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.85■■□□□ 1.09
RAD54BQ9Y620 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAD54BQ9Y620 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.85■■□□□ 1.09
RAD54BQ9Y620 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAD54BQ9Y620 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAD54BQ9Y620 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RAD54BQ9Y620 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAD54BQ9Y620 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
RAD54BQ9Y620 KRT18P11-201ENST00000435214 1283 ntBASIC21.84■■□□□ 1.09
RAD54BQ9Y620 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.84■■□□□ 1.09
RAD54BQ9Y620 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
RAD54BQ9Y620 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.84■■□□□ 1.09
RAD54BQ9Y620 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RAD54BQ9Y620 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.84■■□□□ 1.09
RAD54BQ9Y620 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.84■■□□□ 1.09
RAD54BQ9Y620 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAD54BQ9Y620 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAD54BQ9Y620 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAD54BQ9Y620 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAD54BQ9Y620 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.83■■□□□ 1.09
RAD54BQ9Y620 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.83■■□□□ 1.09
RAD54BQ9Y620 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAD54BQ9Y620 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
RAD54BQ9Y620 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.83■■□□□ 1.09
RAD54BQ9Y620 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAD54BQ9Y620 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RAD54BQ9Y620 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.83■■□□□ 1.09
RAD54BQ9Y620 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.83■■□□□ 1.09
RAD54BQ9Y620 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.83■■□□□ 1.09
RAD54BQ9Y620 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.83■■□□□ 1.09
RAD54BQ9Y620 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.83■■□□□ 1.09
RAD54BQ9Y620 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.83■■□□□ 1.09
RAD54BQ9Y620 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.83■■□□□ 1.09
RAD54BQ9Y620 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RAD54BQ9Y620 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
RAD54BQ9Y620 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
RAD54BQ9Y620 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.83■■□□□ 1.08
RAD54BQ9Y620 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RAD54BQ9Y620 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.83■■□□□ 1.08
RAD54BQ9Y620 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAD54BQ9Y620 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAD54BQ9Y620 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAD54BQ9Y620 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAD54BQ9Y620 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAD54BQ9Y620 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RAD54BQ9Y620 MIR663A-201ENST00000385250 93 ntBASIC21.82■■□□□ 1.08
RAD54BQ9Y620 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.82■■□□□ 1.08
RAD54BQ9Y620 MFSD11-216ENST00000590393 1141 ntBASIC21.82■■□□□ 1.08
RAD54BQ9Y620 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RAD54BQ9Y620 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAD54BQ9Y620 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAD54BQ9Y620 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAD54BQ9Y620 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAD54BQ9Y620 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.82■■□□□ 1.08
RAD54BQ9Y620 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 Z98882.1-201ENST00000622160 2253 ntBASIC21.81■■□□□ 1.08
RAD54BQ9Y620 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 AC104771.1-201ENST00000603335 964 ntBASIC21.81■■□□□ 1.08
RAD54BQ9Y620 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.81■■□□□ 1.08
RAD54BQ9Y620 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAD54BQ9Y620 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAD54BQ9Y620 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAD54BQ9Y620 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.8■■□□□ 1.08
RAD54BQ9Y620 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.8■■□□□ 1.08
RAD54BQ9Y620 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RAD54BQ9Y620 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAD54BQ9Y620 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAD54BQ9Y620 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.8■■□□□ 1.08
RAD54BQ9Y620 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.8■■□□□ 1.08
RAD54BQ9Y620 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.8■■□□□ 1.08
RAD54BQ9Y620 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.8■■□□□ 1.08
RAD54BQ9Y620 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.8■■□□□ 1.08
RAD54BQ9Y620 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.8■■□□□ 1.08
RAD54BQ9Y620 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAD54BQ9Y620 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAD54BQ9Y620 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAD54BQ9Y620 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAD54BQ9Y620 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAD54BQ9Y620 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAD54BQ9Y620 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAD54BQ9Y620 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.79■■□□□ 1.08
RAD54BQ9Y620 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAD54BQ9Y620 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms