Protein–RNA interactions for Protein: Q9Y5U5

TNFRSF18, Tumor necrosis factor receptor superfamily member 18, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18Q9Y5U5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF18Q9Y5U5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF18Q9Y5U5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 pRNA.6-201ENST00000610482 90 ntBASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 pRNA.5-201ENST00000612139 90 ntBASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 AC005837.3-201ENST00000612163 286 ntBASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 pRNA.11-201ENST00000618423 90 ntBASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 pRNA.13-201ENST00000619112 90 ntBASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 AL031602.1-201ENST00000633169 911 ntBASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.22■□□□□ 0.03
TNFRSF18Q9Y5U5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 AC024257.2-201ENST00000549699 147 ntBASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF18Q9Y5U5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TNFRSF18Q9Y5U5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TNFRSF18Q9Y5U5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF18Q9Y5U5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 AC106739.1-201ENST00000617035 715 ntBASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TNFRSF18Q9Y5U5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms