Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN16Q9Y5I7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.67■□□□□ 0.74
CLDN16Q9Y5I7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN16Q9Y5I7 KRT16P2-201ENST00000414673 1423 ntBASIC19.67■□□□□ 0.74
CLDN16Q9Y5I7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN16Q9Y5I7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN16Q9Y5I7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CLDN16Q9Y5I7 Z98882.1-201ENST00000622160 2253 ntBASIC19.66■□□□□ 0.74
CLDN16Q9Y5I7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLDN16Q9Y5I7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN16Q9Y5I7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN16Q9Y5I7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN16Q9Y5I7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.66■□□□□ 0.74
CLDN16Q9Y5I7 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.66■□□□□ 0.74
CLDN16Q9Y5I7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN16Q9Y5I7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CLDN16Q9Y5I7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 RAP2CP1-201ENST00000605103 478 ntBASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN16Q9Y5I7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.64■□□□□ 0.74
CLDN16Q9Y5I7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN16Q9Y5I7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN16Q9Y5I7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN16Q9Y5I7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.64■□□□□ 0.73
CLDN16Q9Y5I7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.64■□□□□ 0.73
CLDN16Q9Y5I7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN16Q9Y5I7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN16Q9Y5I7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN16Q9Y5I7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN16Q9Y5I7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CLDN16Q9Y5I7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN16Q9Y5I7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN16Q9Y5I7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN16Q9Y5I7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN16Q9Y5I7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN16Q9Y5I7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN16Q9Y5I7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN16Q9Y5I7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CLDN16Q9Y5I7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN16Q9Y5I7 DUX4L16-201ENST00000555130 1264 ntBASIC19.63■□□□□ 0.73
CLDN16Q9Y5I7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN16Q9Y5I7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.63■□□□□ 0.73
CLDN16Q9Y5I7 BID-214ENST00000617586 542 ntTSL 5 BASIC19.63■□□□□ 0.73
CLDN16Q9Y5I7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.63■□□□□ 0.73
CLDN16Q9Y5I7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN16Q9Y5I7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN16Q9Y5I7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN16Q9Y5I7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CLDN16Q9Y5I7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN16Q9Y5I7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 CDCA4P2-201ENST00000441182 718 ntBASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 AC080038.1-201ENST00000611274 1154 ntBASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN16Q9Y5I7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.61■□□□□ 0.73
CLDN16Q9Y5I7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN16Q9Y5I7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN16Q9Y5I7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN16Q9Y5I7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN16Q9Y5I7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CLDN16Q9Y5I7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms