Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.72■□□□□ 0.59
SSR3Q9UNL2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR3Q9UNL2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR3Q9UNL2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SSR3Q9UNL2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SSR3Q9UNL2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR3Q9UNL2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.72■□□□□ 0.59
SSR3Q9UNL2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR3Q9UNL2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSR3Q9UNL2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR3Q9UNL2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.72■□□□□ 0.59
SSR3Q9UNL2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR3Q9UNL2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.71■□□□□ 0.59
SSR3Q9UNL2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSR3Q9UNL2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSR3Q9UNL2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSR3Q9UNL2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSR3Q9UNL2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SSR3Q9UNL2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SSR3Q9UNL2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.71■□□□□ 0.59
SSR3Q9UNL2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SSR3Q9UNL2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSR3Q9UNL2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSR3Q9UNL2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSR3Q9UNL2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SSR3Q9UNL2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
SSR3Q9UNL2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.71■□□□□ 0.58
SSR3Q9UNL2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSR3Q9UNL2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSR3Q9UNL2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSR3Q9UNL2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
SSR3Q9UNL2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSR3Q9UNL2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SSR3Q9UNL2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSR3Q9UNL2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.7■□□□□ 0.58
SSR3Q9UNL2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.7■□□□□ 0.58
SSR3Q9UNL2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.7■□□□□ 0.58
SSR3Q9UNL2 AL031602.1-201ENST00000633169 911 ntBASIC18.7■□□□□ 0.58
SSR3Q9UNL2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSR3Q9UNL2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSR3Q9UNL2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSR3Q9UNL2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSR3Q9UNL2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.7■□□□□ 0.58
SSR3Q9UNL2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 PVT1_1.1-201ENST00000615125 194 ntBASIC18.69■□□□□ 0.58
SSR3Q9UNL2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 AC009102.2-201ENST00000606772 1639 ntBASIC18.69■□□□□ 0.58
SSR3Q9UNL2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SSR3Q9UNL2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SSR3Q9UNL2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR3Q9UNL2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR3Q9UNL2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.68■□□□□ 0.58
SSR3Q9UNL2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.68■□□□□ 0.58
SSR3Q9UNL2 AL499627.2-201ENST00000606283 725 ntBASIC18.68■□□□□ 0.58
SSR3Q9UNL2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.68■□□□□ 0.58
SSR3Q9UNL2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.68■□□□□ 0.58
SSR3Q9UNL2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR3Q9UNL2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR3Q9UNL2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.68■□□□□ 0.58
SSR3Q9UNL2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SSR3Q9UNL2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SSR3Q9UNL2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.68■□□□□ 0.58
SSR3Q9UNL2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSR3Q9UNL2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.68■□□□□ 0.58
SSR3Q9UNL2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SSR3Q9UNL2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.67■□□□□ 0.58
SSR3Q9UNL2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSR3Q9UNL2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSR3Q9UNL2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSR3Q9UNL2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSR3Q9UNL2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSR3Q9UNL2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSR3Q9UNL2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.67■□□□□ 0.58
SSR3Q9UNL2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.67■□□□□ 0.58
SSR3Q9UNL2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.67■□□□□ 0.58
SSR3Q9UNL2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SSR3Q9UNL2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSR3Q9UNL2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSR3Q9UNL2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSR3Q9UNL2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSR3Q9UNL2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms