Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 AC009237.3-201ENST00000393279 1427 ntBASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 AF106564.1-201ENST00000607058 2553 ntBASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 AC096631.2-201ENST00000436136 790 ntBASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 AC027682.1-201ENST00000562846 899 ntBASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 AL024507.2-201ENST00000606070 2574 ntBASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.59■□□□□ 0.41
KCNIP1Q9NZI2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.58■□□□□ 0.41
KCNIP1Q9NZI2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
KCNIP1Q9NZI2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNIP1Q9NZI2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.58■□□□□ 0.41
KCNIP1Q9NZI2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.58■□□□□ 0.41
KCNIP1Q9NZI2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNIP1Q9NZI2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.58■□□□□ 0.41
KCNIP1Q9NZI2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.58■□□□□ 0.41
KCNIP1Q9NZI2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
KCNIP1Q9NZI2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
KCNIP1Q9NZI2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.58■□□□□ 0.41
KCNIP1Q9NZI2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KCNIP1Q9NZI2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KCNIP1Q9NZI2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNIP1Q9NZI2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.58■□□□□ 0.4
KCNIP1Q9NZI2 AC099791.1-201ENST00000416440 715 ntBASIC17.58■□□□□ 0.4
KCNIP1Q9NZI2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.58■□□□□ 0.4
KCNIP1Q9NZI2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KCNIP1Q9NZI2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNIP1Q9NZI2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KCNIP1Q9NZI2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNIP1Q9NZI2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNIP1Q9NZI2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KCNIP1Q9NZI2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KCNIP1Q9NZI2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNIP1Q9NZI2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
KCNIP1Q9NZI2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNIP1Q9NZI2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
KCNIP1Q9NZI2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 AC105233.4-201ENST00000642045 216 ntBASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNIP1Q9NZI2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
KCNIP1Q9NZI2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KCNIP1Q9NZI2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KCNIP1Q9NZI2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KCNIP1Q9NZI2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KCNIP1Q9NZI2 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.56■□□□□ 0.4
KCNIP1Q9NZI2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KCNIP1Q9NZI2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
KCNIP1Q9NZI2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KCNIP1Q9NZI2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KCNIP1Q9NZI2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
KCNIP1Q9NZI2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KCNIP1Q9NZI2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KCNIP1Q9NZI2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KCNIP1Q9NZI2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms