Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLE3Q9NRF9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
POLE3Q9NRF9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.51■□□□□ 0.71
POLE3Q9NRF9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.51■□□□□ 0.71
POLE3Q9NRF9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.51■□□□□ 0.71
POLE3Q9NRF9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.51■□□□□ 0.71
POLE3Q9NRF9 TPRG1LP1-201ENST00000598702 760 ntBASIC19.51■□□□□ 0.71
POLE3Q9NRF9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.51■□□□□ 0.71
POLE3Q9NRF9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.51■□□□□ 0.71
POLE3Q9NRF9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLE3Q9NRF9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLE3Q9NRF9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLE3Q9NRF9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
POLE3Q9NRF9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
POLE3Q9NRF9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
POLE3Q9NRF9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.51■□□□□ 0.71
POLE3Q9NRF9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 IRS3P-201ENST00000223076 1006 ntBASIC19.5■□□□□ 0.71
POLE3Q9NRF9 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 MIR638-201ENST00000385237 100 ntBASIC19.5■□□□□ 0.71
POLE3Q9NRF9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.5■□□□□ 0.71
POLE3Q9NRF9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
POLE3Q9NRF9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
POLE3Q9NRF9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
POLE3Q9NRF9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
POLE3Q9NRF9 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.49■□□□□ 0.71
POLE3Q9NRF9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.49■□□□□ 0.71
POLE3Q9NRF9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
POLE3Q9NRF9 AC105265.2-201ENST00000467189 838 ntBASIC19.49■□□□□ 0.71
POLE3Q9NRF9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.49■□□□□ 0.71
POLE3Q9NRF9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.49■□□□□ 0.71
POLE3Q9NRF9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
POLE3Q9NRF9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
POLE3Q9NRF9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
POLE3Q9NRF9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
POLE3Q9NRF9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
POLE3Q9NRF9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.48■□□□□ 0.71
POLE3Q9NRF9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
POLE3Q9NRF9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
POLE3Q9NRF9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
POLE3Q9NRF9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.48■□□□□ 0.71
POLE3Q9NRF9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.48■□□□□ 0.71
POLE3Q9NRF9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
POLE3Q9NRF9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
POLE3Q9NRF9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
POLE3Q9NRF9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.48■□□□□ 0.71
POLE3Q9NRF9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.48■□□□□ 0.71
POLE3Q9NRF9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLE3Q9NRF9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
POLE3Q9NRF9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.47■□□□□ 0.71
POLE3Q9NRF9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLE3Q9NRF9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.47■□□□□ 0.71
POLE3Q9NRF9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
POLE3Q9NRF9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLE3Q9NRF9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLE3Q9NRF9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.47■□□□□ 0.71
POLE3Q9NRF9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.47■□□□□ 0.71
POLE3Q9NRF9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLE3Q9NRF9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
POLE3Q9NRF9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLE3Q9NRF9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
POLE3Q9NRF9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLE3Q9NRF9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLE3Q9NRF9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.46■□□□□ 0.71
POLE3Q9NRF9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLE3Q9NRF9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.46■□□□□ 0.71
POLE3Q9NRF9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLE3Q9NRF9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.46■□□□□ 0.71
POLE3Q9NRF9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
POLE3Q9NRF9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLE3Q9NRF9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
POLE3Q9NRF9 AC027612.3-201ENST00000413684 1047 ntBASIC19.46■□□□□ 0.71
POLE3Q9NRF9 AC053503.5-201ENST00000601508 636 ntBASIC19.46■□□□□ 0.71
POLE3Q9NRF9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
POLE3Q9NRF9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLE3Q9NRF9 AL024507.2-201ENST00000606070 2574 ntBASIC19.45■□□□□ 0.7
POLE3Q9NRF9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms