Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 ABHD17AP1-201ENST00000358206 933 ntBASIC21.56■■□□□ 1.04
SPHK2Q9NRA0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPHK2Q9NRA0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPHK2Q9NRA0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 AC242852.2-201ENST00000615738 1807 ntBASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPHK2Q9NRA0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPHK2Q9NRA0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SPHK2Q9NRA0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.54■■□□□ 1.04
SPHK2Q9NRA0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.54■■□□□ 1.04
SPHK2Q9NRA0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPHK2Q9NRA0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPHK2Q9NRA0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPHK2Q9NRA0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPHK2Q9NRA0 C11orf96-202ENST00000528572 1834 ntBASIC21.54■■□□□ 1.04
SPHK2Q9NRA0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPHK2Q9NRA0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPHK2Q9NRA0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SPHK2Q9NRA0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.54■■□□□ 1.04
SPHK2Q9NRA0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPHK2Q9NRA0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPHK2Q9NRA0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SPHK2Q9NRA0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPHK2Q9NRA0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPHK2Q9NRA0 AC068473.5-201ENST00000616428 2072 ntBASIC21.53■■□□□ 1.04
SPHK2Q9NRA0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.53■■□□□ 1.04
SPHK2Q9NRA0 RARRES2P4-201ENST00000514074 484 ntBASIC21.53■■□□□ 1.04
SPHK2Q9NRA0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.53■■□□□ 1.04
SPHK2Q9NRA0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.53■■□□□ 1.04
SPHK2Q9NRA0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPHK2Q9NRA0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPHK2Q9NRA0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.53■■□□□ 1.04
SPHK2Q9NRA0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SPHK2Q9NRA0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPHK2Q9NRA0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPHK2Q9NRA0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.52■■□□□ 1.04
SPHK2Q9NRA0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPHK2Q9NRA0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.52■■□□□ 1.04
SPHK2Q9NRA0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.52■■□□□ 1.04
SPHK2Q9NRA0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.52■■□□□ 1.04
SPHK2Q9NRA0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.52■■□□□ 1.04
SPHK2Q9NRA0 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.52■■□□□ 1.04
SPHK2Q9NRA0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.52■■□□□ 1.04
SPHK2Q9NRA0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPHK2Q9NRA0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPHK2Q9NRA0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SPHK2Q9NRA0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SPHK2Q9NRA0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
SPHK2Q9NRA0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SPHK2Q9NRA0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.52■■□□□ 1.03
SPHK2Q9NRA0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SPHK2Q9NRA0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.51■■□□□ 1.03
SPHK2Q9NRA0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SPHK2Q9NRA0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.51■■□□□ 1.03
SPHK2Q9NRA0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SPHK2Q9NRA0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SPHK2Q9NRA0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.51■■□□□ 1.03
SPHK2Q9NRA0 BX276092.2-201ENST00000417668 665 ntBASIC21.51■■□□□ 1.03
SPHK2Q9NRA0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPHK2Q9NRA0 AC245052.3-201ENST00000450182 901 ntBASIC21.51■■□□□ 1.03
SPHK2Q9NRA0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.51■■□□□ 1.03
SPHK2Q9NRA0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SPHK2Q9NRA0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
SPHK2Q9NRA0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SPHK2Q9NRA0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.51■■□□□ 1.03
SPHK2Q9NRA0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SPHK2Q9NRA0 AC010980.2-201ENST00000587099 1412 ntBASIC21.5■■□□□ 1.03
SPHK2Q9NRA0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SPHK2Q9NRA0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPHK2Q9NRA0 AC091799.1-201ENST00000422823 811 ntBASIC21.5■■□□□ 1.03
SPHK2Q9NRA0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.5■■□□□ 1.03
SPHK2Q9NRA0 AC092118.2-201ENST00000613495 667 ntBASIC21.5■■□□□ 1.03
SPHK2Q9NRA0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.5■■□□□ 1.03
SPHK2Q9NRA0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SPHK2Q9NRA0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SPHK2Q9NRA0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPHK2Q9NRA0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SPHK2Q9NRA0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.5■■□□□ 1.03
SPHK2Q9NRA0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SPHK2Q9NRA0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SPHK2Q9NRA0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SPHK2Q9NRA0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.49■■□□□ 1.03
SPHK2Q9NRA0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms