Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM9SF3Q9HD45 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.02■□□□□ 0.96
TM9SF3Q9HD45 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.02■□□□□ 0.96
TM9SF3Q9HD45 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM9SF3Q9HD45 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TM9SF3Q9HD45 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM9SF3Q9HD45 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TM9SF3Q9HD45 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
TM9SF3Q9HD45 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TM9SF3Q9HD45 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.02■□□□□ 0.96
TM9SF3Q9HD45 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.02■□□□□ 0.96
TM9SF3Q9HD45 OR10C1-204ENST00000622521 1039 ntBASIC21.02■□□□□ 0.96
TM9SF3Q9HD45 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.02■□□□□ 0.96
TM9SF3Q9HD45 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM9SF3Q9HD45 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TM9SF3Q9HD45 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM9SF3Q9HD45 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.01■□□□□ 0.95
TM9SF3Q9HD45 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM9SF3Q9HD45 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM9SF3Q9HD45 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.01■□□□□ 0.95
TM9SF3Q9HD45 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM9SF3Q9HD45 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TM9SF3Q9HD45 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM9SF3Q9HD45 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TM9SF3Q9HD45 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.01■□□□□ 0.95
TM9SF3Q9HD45 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.01■□□□□ 0.95
TM9SF3Q9HD45 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.01■□□□□ 0.95
TM9SF3Q9HD45 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TM9SF3Q9HD45 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TM9SF3Q9HD45 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM9SF3Q9HD45 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21■□□□□ 0.95
TM9SF3Q9HD45 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21■□□□□ 0.95
TM9SF3Q9HD45 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21■□□□□ 0.95
TM9SF3Q9HD45 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TM9SF3Q9HD45 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TM9SF3Q9HD45 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TM9SF3Q9HD45 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TM9SF3Q9HD45 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21■□□□□ 0.95
TM9SF3Q9HD45 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TM9SF3Q9HD45 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21■□□□□ 0.95
TM9SF3Q9HD45 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21■□□□□ 0.95
TM9SF3Q9HD45 AC008175.2-201ENST00000612840 297 ntBASIC21■□□□□ 0.95
TM9SF3Q9HD45 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21■□□□□ 0.95
TM9SF3Q9HD45 AC120498.10-201ENST00000621827 505 ntBASIC21■□□□□ 0.95
TM9SF3Q9HD45 AC008694.1-202ENST00000636953 945 ntBASIC21■□□□□ 0.95
TM9SF3Q9HD45 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21■□□□□ 0.95
TM9SF3Q9HD45 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21■□□□□ 0.95
TM9SF3Q9HD45 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TM9SF3Q9HD45 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TM9SF3Q9HD45 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TM9SF3Q9HD45 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21■□□□□ 0.95
TM9SF3Q9HD45 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TM9SF3Q9HD45 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TM9SF3Q9HD45 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 AC087742.1-201ENST00000575880 1738 ntBASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 AC093787.1-201ENST00000450396 207 ntBASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 AC069236.1-201ENST00000604339 616 ntBASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 AC016405.3-201ENST00000607710 860 ntBASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM9SF3Q9HD45 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF3Q9HD45 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM9SF3Q9HD45 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms