Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J3Q9H1A7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J3Q9H1A7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J3Q9H1A7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J3Q9H1A7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J3Q9H1A7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
POLR2J3Q9H1A7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J3Q9H1A7 IGHV3-19-201ENST00000521488 291 ntBASIC19.38■□□□□ 0.69
POLR2J3Q9H1A7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J3Q9H1A7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J3Q9H1A7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J3Q9H1A7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
POLR2J3Q9H1A7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 AL049796.1-201ENST00000565336 1766 ntBASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 AC009237.3-201ENST00000393279 1427 ntBASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2J3Q9H1A7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2J3Q9H1A7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 AC126544.1-201ENST00000580842 1059 ntBASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2J3Q9H1A7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 AC135279.3-201ENST00000610945 1311 ntBASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 LINC01006-201ENST00000333319 2292 ntBASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 AL136162.1-201ENST00000607711 1078 ntBASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2J3Q9H1A7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms