Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 FAM99A-202ENST00000538190 1989 ntBASIC23.2■■□□□ 1.3
FAM49AQ9H0Q0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.2■■□□□ 1.3
FAM49AQ9H0Q0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.19■■□□□ 1.3
FAM49AQ9H0Q0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FAM49AQ9H0Q0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
FAM49AQ9H0Q0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FAM49AQ9H0Q0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FAM49AQ9H0Q0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
FAM49AQ9H0Q0 BX276092.2-201ENST00000417668 665 ntBASIC23.19■■□□□ 1.3
FAM49AQ9H0Q0 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.19■■□□□ 1.3
FAM49AQ9H0Q0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.19■■□□□ 1.3
FAM49AQ9H0Q0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.19■■□□□ 1.3
FAM49AQ9H0Q0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.19■■□□□ 1.3
FAM49AQ9H0Q0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
FAM49AQ9H0Q0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
FAM49AQ9H0Q0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.18■■□□□ 1.3
FAM49AQ9H0Q0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.18■■□□□ 1.3
FAM49AQ9H0Q0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.18■■□□□ 1.3
FAM49AQ9H0Q0 AL512625.2-201ENST00000417533 625 ntBASIC23.18■■□□□ 1.3
FAM49AQ9H0Q0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.18■■□□□ 1.3
FAM49AQ9H0Q0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.18■■□□□ 1.3
FAM49AQ9H0Q0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.18■■□□□ 1.3
FAM49AQ9H0Q0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.18■■□□□ 1.3
FAM49AQ9H0Q0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
FAM49AQ9H0Q0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
FAM49AQ9H0Q0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
FAM49AQ9H0Q0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
FAM49AQ9H0Q0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FAM49AQ9H0Q0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FAM49AQ9H0Q0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
FAM49AQ9H0Q0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.17■■□□□ 1.3
FAM49AQ9H0Q0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
FAM49AQ9H0Q0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FAM49AQ9H0Q0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.17■■□□□ 1.3
FAM49AQ9H0Q0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
FAM49AQ9H0Q0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.17■■□□□ 1.3
FAM49AQ9H0Q0 AC243732.1-201ENST00000612648 864 ntBASIC23.17■■□□□ 1.3
FAM49AQ9H0Q0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.17■■□□□ 1.3
FAM49AQ9H0Q0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.17■■□□□ 1.3
FAM49AQ9H0Q0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.17■■□□□ 1.3
FAM49AQ9H0Q0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.17■■□□□ 1.3
FAM49AQ9H0Q0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FAM49AQ9H0Q0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
FAM49AQ9H0Q0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.16■■□□□ 1.3
FAM49AQ9H0Q0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.16■■□□□ 1.3
FAM49AQ9H0Q0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
FAM49AQ9H0Q0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FAM49AQ9H0Q0 C11orf96-202ENST00000528572 1834 ntBASIC23.16■■□□□ 1.3
FAM49AQ9H0Q0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FAM49AQ9H0Q0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.16■■□□□ 1.3
FAM49AQ9H0Q0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.16■■□□□ 1.3
FAM49AQ9H0Q0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
FAM49AQ9H0Q0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 RNA5SP413-201ENST00000516373 109 ntBASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FAM49AQ9H0Q0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.14■■□□□ 1.3
FAM49AQ9H0Q0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
FAM49AQ9H0Q0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
FAM49AQ9H0Q0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
FAM49AQ9H0Q0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.14■■□□□ 1.29
FAM49AQ9H0Q0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
FAM49AQ9H0Q0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.14■■□□□ 1.29
FAM49AQ9H0Q0 RARRES2P4-201ENST00000514074 484 ntBASIC23.14■■□□□ 1.29
FAM49AQ9H0Q0 AC092118.2-201ENST00000613495 667 ntBASIC23.14■■□□□ 1.29
FAM49AQ9H0Q0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.14■■□□□ 1.29
FAM49AQ9H0Q0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
FAM49AQ9H0Q0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
FAM49AQ9H0Q0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
FAM49AQ9H0Q0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
FAM49AQ9H0Q0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
FAM49AQ9H0Q0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.13■■□□□ 1.29
FAM49AQ9H0Q0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FAM49AQ9H0Q0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
FAM49AQ9H0Q0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
FAM49AQ9H0Q0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
FAM49AQ9H0Q0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FAM49AQ9H0Q0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
FAM49AQ9H0Q0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
FAM49AQ9H0Q0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.13■■□□□ 1.29
FAM49AQ9H0Q0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.13■■□□□ 1.29
FAM49AQ9H0Q0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FAM49AQ9H0Q0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
FAM49AQ9H0Q0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms