Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF38Q9H0F5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF38Q9H0F5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF38Q9H0F5 C11orf96-202ENST00000528572 1834 ntBASIC21.86■■□□□ 1.09
RNF38Q9H0F5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF38Q9H0F5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF38Q9H0F5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF38Q9H0F5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF38Q9H0F5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.86■■□□□ 1.09
RNF38Q9H0F5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.86■■□□□ 1.09
RNF38Q9H0F5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF38Q9H0F5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF38Q9H0F5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF38Q9H0F5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF38Q9H0F5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF38Q9H0F5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF38Q9H0F5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF38Q9H0F5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF38Q9H0F5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
RNF38Q9H0F5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.85■■□□□ 1.09
RNF38Q9H0F5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF38Q9H0F5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF38Q9H0F5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RNF38Q9H0F5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF38Q9H0F5 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF38Q9H0F5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RNF38Q9H0F5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF38Q9H0F5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF38Q9H0F5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF38Q9H0F5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 SLC29A4P1-201ENST00000398760 971 ntBASIC21.84■■□□□ 1.09
RNF38Q9H0F5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF38Q9H0F5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF38Q9H0F5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF38Q9H0F5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF38Q9H0F5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF38Q9H0F5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF38Q9H0F5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF38Q9H0F5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF38Q9H0F5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
RNF38Q9H0F5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF38Q9H0F5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF38Q9H0F5 AC243732.1-201ENST00000612648 864 ntBASIC21.83■■□□□ 1.09
RNF38Q9H0F5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.83■■□□□ 1.09
RNF38Q9H0F5 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.83■■□□□ 1.09
RNF38Q9H0F5 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.83■■□□□ 1.09
RNF38Q9H0F5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF38Q9H0F5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF38Q9H0F5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF38Q9H0F5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RNF38Q9H0F5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF38Q9H0F5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF38Q9H0F5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF38Q9H0F5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF38Q9H0F5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF38Q9H0F5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RNF38Q9H0F5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF38Q9H0F5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.82■■□□□ 1.08
RNF38Q9H0F5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF38Q9H0F5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RNF38Q9H0F5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF38Q9H0F5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF38Q9H0F5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.82■■□□□ 1.08
RNF38Q9H0F5 AC093787.1-201ENST00000450396 207 ntBASIC21.82■■□□□ 1.08
RNF38Q9H0F5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF38Q9H0F5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF38Q9H0F5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF38Q9H0F5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF38Q9H0F5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF38Q9H0F5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF38Q9H0F5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF38Q9H0F5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF38Q9H0F5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RNF38Q9H0F5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.81■■□□□ 1.08
RNF38Q9H0F5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.81■■□□□ 1.08
RNF38Q9H0F5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.81■■□□□ 1.08
RNF38Q9H0F5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF38Q9H0F5 AC016405.3-201ENST00000607710 860 ntBASIC21.81■■□□□ 1.08
RNF38Q9H0F5 OR10C1-204ENST00000622521 1039 ntBASIC21.81■■□□□ 1.08
RNF38Q9H0F5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF38Q9H0F5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF38Q9H0F5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms