Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.12■□□□□ 0.97
CLPBQ9H078 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CLPBQ9H078 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLPBQ9H078 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLPBQ9H078 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.12■□□□□ 0.97
CLPBQ9H078 AC104187.1-201ENST00000607510 612 ntBASIC21.12■□□□□ 0.97
CLPBQ9H078 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLPBQ9H078 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLPBQ9H078 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CLPBQ9H078 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CLPBQ9H078 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CLPBQ9H078 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CLPBQ9H078 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CLPBQ9H078 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.11■□□□□ 0.97
CLPBQ9H078 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLPBQ9H078 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLPBQ9H078 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLPBQ9H078 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLPBQ9H078 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CLPBQ9H078 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLPBQ9H078 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.11■□□□□ 0.97
CLPBQ9H078 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.11■□□□□ 0.97
CLPBQ9H078 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.11■□□□□ 0.97
CLPBQ9H078 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.11■□□□□ 0.97
CLPBQ9H078 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.11■□□□□ 0.97
CLPBQ9H078 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLPBQ9H078 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLPBQ9H078 KRT87P-202ENST00000534226 1464 ntBASIC21.11■□□□□ 0.97
CLPBQ9H078 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CLPBQ9H078 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CLPBQ9H078 AC244015.2-201ENST00000616358 1861 ntBASIC21.11■□□□□ 0.97
CLPBQ9H078 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.11■□□□□ 0.97
CLPBQ9H078 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLPBQ9H078 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLPBQ9H078 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLPBQ9H078 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.1■□□□□ 0.97
CLPBQ9H078 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLPBQ9H078 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.1■□□□□ 0.97
CLPBQ9H078 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.1■□□□□ 0.97
CLPBQ9H078 HLA-L-209ENST00000420110 1011 ntBASIC21.1■□□□□ 0.97
CLPBQ9H078 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLPBQ9H078 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.1■□□□□ 0.97
CLPBQ9H078 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLPBQ9H078 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLPBQ9H078 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLPBQ9H078 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLPBQ9H078 AC003102.1-202ENST00000563394 1796 ntBASIC21.1■□□□□ 0.97
CLPBQ9H078 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLPBQ9H078 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.1■□□□□ 0.97
CLPBQ9H078 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLPBQ9H078 AC055733.4-201ENST00000638462 1354 ntBASIC21.1■□□□□ 0.97
CLPBQ9H078 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLPBQ9H078 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CLPBQ9H078 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLPBQ9H078 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.09■□□□□ 0.97
CLPBQ9H078 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.09■□□□□ 0.97
CLPBQ9H078 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.09■□□□□ 0.97
CLPBQ9H078 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLPBQ9H078 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLPBQ9H078 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLPBQ9H078 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.09■□□□□ 0.97
CLPBQ9H078 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.09■□□□□ 0.97
CLPBQ9H078 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CLPBQ9H078 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CLPBQ9H078 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.08■□□□□ 0.97
CLPBQ9H078 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CLPBQ9H078 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CLPBQ9H078 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLPBQ9H078 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLPBQ9H078 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.08■□□□□ 0.97
CLPBQ9H078 AC026185.1-201ENST00000445748 174 ntBASIC21.08■□□□□ 0.97
CLPBQ9H078 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLPBQ9H078 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CLPBQ9H078 AC011767.1-201ENST00000617410 1153 ntBASIC21.08■□□□□ 0.97
CLPBQ9H078 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLPBQ9H078 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.08■□□□□ 0.96
CLPBQ9H078 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLPBQ9H078 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CLPBQ9H078 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.08■□□□□ 0.96
CLPBQ9H078 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.08■□□□□ 0.96
CLPBQ9H078 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.08■□□□□ 0.96
CLPBQ9H078 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CLPBQ9H078 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CLPBQ9H078 KRT18P11-201ENST00000435214 1283 ntBASIC21.07■□□□□ 0.96
CLPBQ9H078 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLPBQ9H078 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.07■□□□□ 0.96
CLPBQ9H078 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.07■□□□□ 0.96
CLPBQ9H078 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.07■□□□□ 0.96
CLPBQ9H078 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
CLPBQ9H078 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.07■□□□□ 0.96
CLPBQ9H078 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.07■□□□□ 0.96
CLPBQ9H078 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CLPBQ9H078 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.07■□□□□ 0.96
CLPBQ9H078 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLPBQ9H078 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLPBQ9H078 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLPBQ9H078 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLPBQ9H078 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.06■□□□□ 0.96
CLPBQ9H078 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLPBQ9H078 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms