Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 AL034346.1-201ENST00000568244 1277 ntBASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 AC011298.3-201ENST00000615796 283 ntBASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 AC135279.3-201ENST00000610945 1311 ntBASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AMBRA1Q9C0C7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AMBRA1Q9C0C7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AMBRA1Q9C0C7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
AMBRA1Q9C0C7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.61■□□□□ 0.73
AMBRA1Q9C0C7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AMBRA1Q9C0C7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
AMBRA1Q9C0C7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
AMBRA1Q9C0C7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.61■□□□□ 0.73
AMBRA1Q9C0C7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AMBRA1Q9C0C7 AC024257.2-201ENST00000549699 147 ntBASIC19.61■□□□□ 0.73
AMBRA1Q9C0C7 AL049796.1-201ENST00000565336 1766 ntBASIC19.61■□□□□ 0.73
AMBRA1Q9C0C7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
AMBRA1Q9C0C7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
AMBRA1Q9C0C7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AMBRA1Q9C0C7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.6■□□□□ 0.73
AMBRA1Q9C0C7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
AMBRA1Q9C0C7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AMBRA1Q9C0C7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AMBRA1Q9C0C7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
AMBRA1Q9C0C7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.6■□□□□ 0.73
AMBRA1Q9C0C7 PBX2P1-201ENST00000493219 1291 ntBASIC19.6■□□□□ 0.73
AMBRA1Q9C0C7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.6■□□□□ 0.73
AMBRA1Q9C0C7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.6■□□□□ 0.73
AMBRA1Q9C0C7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.6■□□□□ 0.73
AMBRA1Q9C0C7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
AMBRA1Q9C0C7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.6■□□□□ 0.73
AMBRA1Q9C0C7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AMBRA1Q9C0C7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AMBRA1Q9C0C7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
AMBRA1Q9C0C7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.6■□□□□ 0.73
AMBRA1Q9C0C7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AMBRA1Q9C0C7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AMBRA1Q9C0C7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AMBRA1Q9C0C7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
AMBRA1Q9C0C7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
AMBRA1Q9C0C7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
AMBRA1Q9C0C7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
AMBRA1Q9C0C7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AMBRA1Q9C0C7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AMBRA1Q9C0C7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AMBRA1Q9C0C7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.59■□□□□ 0.73
AMBRA1Q9C0C7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AMBRA1Q9C0C7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
AMBRA1Q9C0C7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
AMBRA1Q9C0C7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
AMBRA1Q9C0C7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AMBRA1Q9C0C7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.59■□□□□ 0.73
AMBRA1Q9C0C7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.59■□□□□ 0.73
AMBRA1Q9C0C7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AMBRA1Q9C0C7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AMBRA1Q9C0C7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.58■□□□□ 0.73
AMBRA1Q9C0C7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.58■□□□□ 0.73
AMBRA1Q9C0C7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.58■□□□□ 0.73
AMBRA1Q9C0C7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.58■□□□□ 0.73
AMBRA1Q9C0C7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
AMBRA1Q9C0C7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
AMBRA1Q9C0C7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.58■□□□□ 0.73
AMBRA1Q9C0C7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.58■□□□□ 0.72
AMBRA1Q9C0C7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
AMBRA1Q9C0C7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AMBRA1Q9C0C7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
AMBRA1Q9C0C7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
AMBRA1Q9C0C7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.57■□□□□ 0.72
AMBRA1Q9C0C7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AMBRA1Q9C0C7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AMBRA1Q9C0C7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms