Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
THUMPD3Q9BV44 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
THUMPD3Q9BV44 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.03■□□□□ 0.8
THUMPD3Q9BV44 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.03■□□□□ 0.8
THUMPD3Q9BV44 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
THUMPD3Q9BV44 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.03■□□□□ 0.8
THUMPD3Q9BV44 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
THUMPD3Q9BV44 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
THUMPD3Q9BV44 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.02■□□□□ 0.8
THUMPD3Q9BV44 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.02■□□□□ 0.8
THUMPD3Q9BV44 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THUMPD3Q9BV44 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THUMPD3Q9BV44 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.02■□□□□ 0.8
THUMPD3Q9BV44 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.02■□□□□ 0.8
THUMPD3Q9BV44 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THUMPD3Q9BV44 UNC93B3-201ENST00000308076 687 ntBASIC20.02■□□□□ 0.8
THUMPD3Q9BV44 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
THUMPD3Q9BV44 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.02■□□□□ 0.8
THUMPD3Q9BV44 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.02■□□□□ 0.8
THUMPD3Q9BV44 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.02■□□□□ 0.8
THUMPD3Q9BV44 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THUMPD3Q9BV44 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THUMPD3Q9BV44 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
THUMPD3Q9BV44 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
THUMPD3Q9BV44 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
THUMPD3Q9BV44 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
THUMPD3Q9BV44 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.02■□□□□ 0.79
THUMPD3Q9BV44 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
THUMPD3Q9BV44 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
THUMPD3Q9BV44 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.02■□□□□ 0.79
THUMPD3Q9BV44 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 AC011298.3-201ENST00000615796 283 ntBASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD3Q9BV44 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20■□□□□ 0.79
THUMPD3Q9BV44 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THUMPD3Q9BV44 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20■□□□□ 0.79
THUMPD3Q9BV44 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THUMPD3Q9BV44 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20■□□□□ 0.79
THUMPD3Q9BV44 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
THUMPD3Q9BV44 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
THUMPD3Q9BV44 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
THUMPD3Q9BV44 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
THUMPD3Q9BV44 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20■□□□□ 0.79
THUMPD3Q9BV44 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20■□□□□ 0.79
THUMPD3Q9BV44 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20■□□□□ 0.79
THUMPD3Q9BV44 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20■□□□□ 0.79
THUMPD3Q9BV44 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
THUMPD3Q9BV44 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
THUMPD3Q9BV44 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THUMPD3Q9BV44 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
THUMPD3Q9BV44 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20■□□□□ 0.79
THUMPD3Q9BV44 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
THUMPD3Q9BV44 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
THUMPD3Q9BV44 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
THUMPD3Q9BV44 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
THUMPD3Q9BV44 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
THUMPD3Q9BV44 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.99■□□□□ 0.79
THUMPD3Q9BV44 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
THUMPD3Q9BV44 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.99■□□□□ 0.79
THUMPD3Q9BV44 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.99■□□□□ 0.79
THUMPD3Q9BV44 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.99■□□□□ 0.79
THUMPD3Q9BV44 AC136469.2-201ENST00000623944 1028 ntBASIC19.99■□□□□ 0.79
THUMPD3Q9BV44 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
THUMPD3Q9BV44 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.99■□□□□ 0.79
THUMPD3Q9BV44 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
THUMPD3Q9BV44 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
THUMPD3Q9BV44 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
THUMPD3Q9BV44 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD3Q9BV44 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD3Q9BV44 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD3Q9BV44 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD3Q9BV44 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD3Q9BV44 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD3Q9BV44 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD3Q9BV44 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.98■□□□□ 0.79
THUMPD3Q9BV44 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD3Q9BV44 FEM1AP1-201ENST00000431297 1995 ntBASIC19.98■□□□□ 0.79
THUMPD3Q9BV44 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD3Q9BV44 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
THUMPD3Q9BV44 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD3Q9BV44 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD3Q9BV44 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD3Q9BV44 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms