Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC30.44■■■□□ 2.46
SCAF11Q99590 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SCAF11Q99590 AC010331.1-201ENST00000611423 582 ntBASIC30.44■■■□□ 2.46
SCAF11Q99590 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC30.44■■■□□ 2.46
SCAF11Q99590 AC137767.1-201ENST00000602918 1920 ntBASIC30.44■■■□□ 2.46
SCAF11Q99590 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC30.43■■■□□ 2.46
SCAF11Q99590 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SCAF11Q99590 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
SCAF11Q99590 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
SCAF11Q99590 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SCAF11Q99590 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SCAF11Q99590 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
SCAF11Q99590 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC30.43■■■□□ 2.46
SCAF11Q99590 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC30.43■■■□□ 2.46
SCAF11Q99590 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC30.43■■■□□ 2.46
SCAF11Q99590 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC30.43■■■□□ 2.46
SCAF11Q99590 PBX1-209ENST00000485769 834 ntTSL 2 BASIC30.43■■■□□ 2.46
SCAF11Q99590 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SCAF11Q99590 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SCAF11Q99590 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC30.42■■■□□ 2.46
SCAF11Q99590 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
SCAF11Q99590 KRT17P1-201ENST00000399211 1546 ntBASIC30.42■■■□□ 2.46
SCAF11Q99590 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SCAF11Q99590 RPPH1-201ENST00000516869 333 ntBASIC30.42■■■□□ 2.46
SCAF11Q99590 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC30.42■■■□□ 2.46
SCAF11Q99590 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SCAF11Q99590 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC30.42■■■□□ 2.46
SCAF11Q99590 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC30.42■■■□□ 2.46
SCAF11Q99590 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SCAF11Q99590 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC30.41■■■□□ 2.46
SCAF11Q99590 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SCAF11Q99590 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
SCAF11Q99590 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SCAF11Q99590 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC30.41■■■□□ 2.46
SCAF11Q99590 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC30.41■■■□□ 2.46
SCAF11Q99590 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
SCAF11Q99590 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SCAF11Q99590 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SCAF11Q99590 COMT-203ENST00000403184 2217 ntTSL 2 BASIC30.4■■■□□ 2.46
SCAF11Q99590 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SCAF11Q99590 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
SCAF11Q99590 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC30.4■■■□□ 2.46
SCAF11Q99590 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SCAF11Q99590 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC30.4■■■□□ 2.46
SCAF11Q99590 LSM12P1-201ENST00000411836 588 ntBASIC30.4■■■□□ 2.46
SCAF11Q99590 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC30.4■■■□□ 2.46
SCAF11Q99590 RNF146-206ENST00000480444 843 ntTSL 2 BASIC30.4■■■□□ 2.46
SCAF11Q99590 CD44-222ENST00000526025 1052 ntTSL 2 BASIC30.4■■■□□ 2.46
SCAF11Q99590 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC30.4■■■□□ 2.46
SCAF11Q99590 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC30.4■■■□□ 2.46
SCAF11Q99590 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SCAF11Q99590 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC30.4■■■□□ 2.46
SCAF11Q99590 FAM197Y4-202ENST00000622692 608 ntBASIC30.4■■■□□ 2.46
SCAF11Q99590 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
SCAF11Q99590 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC30.4■■■□□ 2.46
SCAF11Q99590 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC30.4■■■□□ 2.46
SCAF11Q99590 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
SCAF11Q99590 SNORA78-201ENST00000459373 127 ntBASIC30.39■■■□□ 2.46
SCAF11Q99590 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SCAF11Q99590 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC30.39■■■□□ 2.46
SCAF11Q99590 CBFB-203ENST00000561924 584 ntTSL 5 BASIC30.39■■■□□ 2.46
SCAF11Q99590 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC30.39■■■□□ 2.46
SCAF11Q99590 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SCAF11Q99590 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SCAF11Q99590 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.46
SCAF11Q99590 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC30.39■■■□□ 2.45
SCAF11Q99590 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF11Q99590 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF11Q99590 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF11Q99590 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC30.38■■■□□ 2.45
SCAF11Q99590 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF11Q99590 HLA-B-256ENST00000639848 1089 ntBASIC30.38■■■□□ 2.45
SCAF11Q99590 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF11Q99590 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF11Q99590 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC30.38■■■□□ 2.45
SCAF11Q99590 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
SCAF11Q99590 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF11Q99590 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF11Q99590 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF11Q99590 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF11Q99590 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF11Q99590 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF11Q99590 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC30.38■■■□□ 2.45
SCAF11Q99590 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF11Q99590 C1QBPP2-201ENST00000528754 825 ntBASIC30.38■■■□□ 2.45
SCAF11Q99590 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC30.38■■■□□ 2.45
SCAF11Q99590 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF11Q99590 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SCAF11Q99590 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SCAF11Q99590 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SCAF11Q99590 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SCAF11Q99590 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC30.37■■■□□ 2.45
SCAF11Q99590 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC30.37■■■□□ 2.45
SCAF11Q99590 NME6-213ENST00000451657 871 ntTSL 2 BASIC30.37■■■□□ 2.45
SCAF11Q99590 MAX-217ENST00000557277 728 ntTSL 3 BASIC30.37■■■□□ 2.45
SCAF11Q99590 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC30.37■■■□□ 2.45
SCAF11Q99590 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC30.36■■■□□ 2.45
SCAF11Q99590 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC30.36■■■□□ 2.45
SCAF11Q99590 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SCAF11Q99590 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC30.36■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms