Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.59■□□□□ 0.41
CLCC1Q96S66 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLCC1Q96S66 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCC1Q96S66 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCC1Q96S66 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.59■□□□□ 0.41
CLCC1Q96S66 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCC1Q96S66 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCC1Q96S66 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLCC1Q96S66 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CLCC1Q96S66 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCC1Q96S66 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCC1Q96S66 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCC1Q96S66 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLCC1Q96S66 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.59■□□□□ 0.41
CLCC1Q96S66 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCC1Q96S66 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLCC1Q96S66 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CLCC1Q96S66 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCC1Q96S66 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCC1Q96S66 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCC1Q96S66 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCC1Q96S66 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CLCC1Q96S66 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CLCC1Q96S66 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLCC1Q96S66 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CLCC1Q96S66 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLCC1Q96S66 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.58■□□□□ 0.4
CLCC1Q96S66 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCC1Q96S66 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCC1Q96S66 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.58■□□□□ 0.4
CLCC1Q96S66 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.58■□□□□ 0.4
CLCC1Q96S66 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.58■□□□□ 0.4
CLCC1Q96S66 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCC1Q96S66 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCC1Q96S66 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCC1Q96S66 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLCC1Q96S66 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CLCC1Q96S66 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLCC1Q96S66 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CLCC1Q96S66 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCC1Q96S66 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CLCC1Q96S66 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLCC1Q96S66 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCC1Q96S66 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCC1Q96S66 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCC1Q96S66 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCC1Q96S66 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCC1Q96S66 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCC1Q96S66 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCC1Q96S66 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCC1Q96S66 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCC1Q96S66 AL136116.3-201ENST00000402907 1138 ntBASIC17.57■□□□□ 0.4
CLCC1Q96S66 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CLCC1Q96S66 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCC1Q96S66 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCC1Q96S66 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCC1Q96S66 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCC1Q96S66 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.57■□□□□ 0.4
CLCC1Q96S66 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLCC1Q96S66 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCC1Q96S66 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLCC1Q96S66 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCC1Q96S66 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCC1Q96S66 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCC1Q96S66 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCC1Q96S66 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCC1Q96S66 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCC1Q96S66 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCC1Q96S66 AC092171.4-201ENST00000609130 632 ntBASIC17.56■□□□□ 0.4
CLCC1Q96S66 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCC1Q96S66 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCC1Q96S66 LINC01521-201ENST00000504184 1943 ntBASIC17.56■□□□□ 0.4
CLCC1Q96S66 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CLCC1Q96S66 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCC1Q96S66 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CLCC1Q96S66 AC133637.1-201ENST00000624115 1537 ntBASIC17.56■□□□□ 0.4
CLCC1Q96S66 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCC1Q96S66 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CLCC1Q96S66 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCC1Q96S66 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCC1Q96S66 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCC1Q96S66 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCC1Q96S66 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCC1Q96S66 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCC1Q96S66 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCC1Q96S66 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.55■□□□□ 0.4
CLCC1Q96S66 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCC1Q96S66 MIR3181-201ENST00000578512 73 ntBASIC17.55■□□□□ 0.4
CLCC1Q96S66 AL499627.2-201ENST00000606283 725 ntBASIC17.55■□□□□ 0.4
CLCC1Q96S66 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CLCC1Q96S66 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCC1Q96S66 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCC1Q96S66 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCC1Q96S66 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCC1Q96S66 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCC1Q96S66 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCC1Q96S66 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCC1Q96S66 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCC1Q96S66 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCC1Q96S66 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms