Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TWNKQ96RR1 AC092666.2-201ENST00000613287 246 ntBASIC22.4■■□□□ 1.18
TWNKQ96RR1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TWNKQ96RR1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.4■■□□□ 1.18
TWNKQ96RR1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TWNKQ96RR1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.39■■□□□ 1.18
TWNKQ96RR1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.39■■□□□ 1.18
TWNKQ96RR1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
TWNKQ96RR1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
TWNKQ96RR1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
TWNKQ96RR1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.39■■□□□ 1.17
TWNKQ96RR1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.39■■□□□ 1.17
TWNKQ96RR1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
TWNKQ96RR1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TWNKQ96RR1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.38■■□□□ 1.17
TWNKQ96RR1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
TWNKQ96RR1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TWNKQ96RR1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TWNKQ96RR1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TWNKQ96RR1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.38■■□□□ 1.17
TWNKQ96RR1 AC008175.2-201ENST00000612840 297 ntBASIC22.38■■□□□ 1.17
TWNKQ96RR1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
TWNKQ96RR1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
TWNKQ96RR1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TWNKQ96RR1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
TWNKQ96RR1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
TWNKQ96RR1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
TWNKQ96RR1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TWNKQ96RR1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.37■■□□□ 1.17
TWNKQ96RR1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.37■■□□□ 1.17
TWNKQ96RR1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.37■■□□□ 1.17
TWNKQ96RR1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.37■■□□□ 1.17
TWNKQ96RR1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TWNKQ96RR1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TWNKQ96RR1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.37■■□□□ 1.17
TWNKQ96RR1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.37■■□□□ 1.17
TWNKQ96RR1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TWNKQ96RR1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
TWNKQ96RR1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.36■■□□□ 1.17
TWNKQ96RR1 AC026310.3-201ENST00000625186 2373 ntBASIC22.36■■□□□ 1.17
TWNKQ96RR1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TWNKQ96RR1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
TWNKQ96RR1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TWNKQ96RR1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.36■■□□□ 1.17
TWNKQ96RR1 POU5F1P4-201ENST00000413175 1085 ntBASIC22.36■■□□□ 1.17
TWNKQ96RR1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TWNKQ96RR1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.36■■□□□ 1.17
TWNKQ96RR1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.36■■□□□ 1.17
TWNKQ96RR1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.36■■□□□ 1.17
TWNKQ96RR1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TWNKQ96RR1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TWNKQ96RR1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.35■■□□□ 1.17
TWNKQ96RR1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.35■■□□□ 1.17
TWNKQ96RR1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.35■■□□□ 1.17
TWNKQ96RR1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
TWNKQ96RR1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.35■■□□□ 1.17
TWNKQ96RR1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TWNKQ96RR1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
TWNKQ96RR1 AC016769.1-201ENST00000409132 1010 ntBASIC22.35■■□□□ 1.17
TWNKQ96RR1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
TWNKQ96RR1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.35■■□□□ 1.17
TWNKQ96RR1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TWNKQ96RR1 KRT18P20-201ENST00000548986 1279 ntBASIC22.35■■□□□ 1.17
TWNKQ96RR1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TWNKQ96RR1 MYCNOS-205ENST00000641950 531 ntBASIC22.35■■□□□ 1.17
TWNKQ96RR1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.35■■□□□ 1.17
TWNKQ96RR1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
TWNKQ96RR1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
TWNKQ96RR1 AC007375.3-201ENST00000600936 2314 ntBASIC22.35■■□□□ 1.17
TWNKQ96RR1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
TWNKQ96RR1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.34■■□□□ 1.17
TWNKQ96RR1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TWNKQ96RR1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TWNKQ96RR1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TWNKQ96RR1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.34■■□□□ 1.17
TWNKQ96RR1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.34■■□□□ 1.17
TWNKQ96RR1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
TWNKQ96RR1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TWNKQ96RR1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.34■■□□□ 1.17
TWNKQ96RR1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TWNKQ96RR1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TWNKQ96RR1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TWNKQ96RR1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.34■■□□□ 1.17
TWNKQ96RR1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.34■■□□□ 1.17
TWNKQ96RR1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TWNKQ96RR1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.33■■□□□ 1.17
TWNKQ96RR1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TWNKQ96RR1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TWNKQ96RR1 AC004911.1-201ENST00000416316 871 ntBASIC22.33■■□□□ 1.17
TWNKQ96RR1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.33■■□□□ 1.17
TWNKQ96RR1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TWNKQ96RR1 AL137784.2-201ENST00000607332 1000 ntBASIC22.33■■□□□ 1.17
TWNKQ96RR1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.33■■□□□ 1.17
TWNKQ96RR1 AC011767.1-201ENST00000617410 1153 ntBASIC22.33■■□□□ 1.17
TWNKQ96RR1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TWNKQ96RR1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TWNKQ96RR1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TWNKQ96RR1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TWNKQ96RR1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
TWNKQ96RR1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms