Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.9■■□□□ 1.58
NEK1Q96PY6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
NEK1Q96PY6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NEK1Q96PY6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NEK1Q96PY6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC24.9■■□□□ 1.58
NEK1Q96PY6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC24.89■■□□□ 1.58
NEK1Q96PY6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
NEK1Q96PY6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
NEK1Q96PY6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.89■■□□□ 1.58
NEK1Q96PY6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24.89■■□□□ 1.58
NEK1Q96PY6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.89■■□□□ 1.58
NEK1Q96PY6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
NEK1Q96PY6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
NEK1Q96PY6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
NEK1Q96PY6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
NEK1Q96PY6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
NEK1Q96PY6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NEK1Q96PY6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
NEK1Q96PY6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC24.88■■□□□ 1.57
NEK1Q96PY6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NEK1Q96PY6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
NEK1Q96PY6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
NEK1Q96PY6 KRT18P14-201ENST00000534205 1250 ntBASIC24.88■■□□□ 1.57
NEK1Q96PY6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.88■■□□□ 1.57
NEK1Q96PY6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
NEK1Q96PY6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
NEK1Q96PY6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.88■■□□□ 1.57
NEK1Q96PY6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
NEK1Q96PY6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NEK1Q96PY6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC24.87■■□□□ 1.57
NEK1Q96PY6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
NEK1Q96PY6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
NEK1Q96PY6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.87■■□□□ 1.57
NEK1Q96PY6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.87■■□□□ 1.57
NEK1Q96PY6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
NEK1Q96PY6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC24.87■■□□□ 1.57
NEK1Q96PY6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NEK1Q96PY6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NEK1Q96PY6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
NEK1Q96PY6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
NEK1Q96PY6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
NEK1Q96PY6 AC061975.6-201ENST00000579045 1553 ntBASIC24.86■■□□□ 1.57
NEK1Q96PY6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.86■■□□□ 1.57
NEK1Q96PY6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NEK1Q96PY6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.86■■□□□ 1.57
NEK1Q96PY6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.86■■□□□ 1.57
NEK1Q96PY6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.86■■□□□ 1.57
NEK1Q96PY6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
NEK1Q96PY6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NEK1Q96PY6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NEK1Q96PY6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NEK1Q96PY6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NEK1Q96PY6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NEK1Q96PY6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.85■■□□□ 1.57
NEK1Q96PY6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.85■■□□□ 1.57
NEK1Q96PY6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.85■■□□□ 1.57
NEK1Q96PY6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.85■■□□□ 1.57
NEK1Q96PY6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NEK1Q96PY6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NEK1Q96PY6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
NEK1Q96PY6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NEK1Q96PY6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NEK1Q96PY6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NEK1Q96PY6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NEK1Q96PY6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NEK1Q96PY6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
NEK1Q96PY6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
NEK1Q96PY6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.84■■□□□ 1.57
NEK1Q96PY6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.84■■□□□ 1.57
NEK1Q96PY6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
NEK1Q96PY6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.84■■□□□ 1.57
NEK1Q96PY6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
NEK1Q96PY6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
NEK1Q96PY6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC24.84■■□□□ 1.57
NEK1Q96PY6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NEK1Q96PY6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NEK1Q96PY6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NEK1Q96PY6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
NEK1Q96PY6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NEK1Q96PY6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
NEK1Q96PY6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
NEK1Q96PY6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
NEK1Q96PY6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
NEK1Q96PY6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.83■■□□□ 1.57
NEK1Q96PY6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.83■■□□□ 1.57
NEK1Q96PY6 AC138907.5-202ENST00000569484 235 ntBASIC24.83■■□□□ 1.57
NEK1Q96PY6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.83■■□□□ 1.57
NEK1Q96PY6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
NEK1Q96PY6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
NEK1Q96PY6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC24.83■■□□□ 1.56
NEK1Q96PY6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
NEK1Q96PY6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NEK1Q96PY6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.82■■□□□ 1.56
NEK1Q96PY6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC24.82■■□□□ 1.56
NEK1Q96PY6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.82■■□□□ 1.56
NEK1Q96PY6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
NEK1Q96PY6 AC104187.1-201ENST00000607510 612 ntBASIC24.82■■□□□ 1.56
NEK1Q96PY6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC24.82■■□□□ 1.56
NEK1Q96PY6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
NEK1Q96PY6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms