Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.53■□□□□ 0.4
GAFA1Q96PS6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.53■□□□□ 0.4
GAFA1Q96PS6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.53■□□□□ 0.4
GAFA1Q96PS6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.53■□□□□ 0.4
GAFA1Q96PS6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GAFA1Q96PS6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GAFA1Q96PS6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GAFA1Q96PS6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 POU5F1P4-201ENST00000413175 1085 ntBASIC17.52■□□□□ 0.4
GAFA1Q96PS6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.52■□□□□ 0.4
GAFA1Q96PS6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GAFA1Q96PS6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.52■□□□□ 0.39
GAFA1Q96PS6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GAFA1Q96PS6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GAFA1Q96PS6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
GAFA1Q96PS6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GAFA1Q96PS6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GAFA1Q96PS6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GAFA1Q96PS6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.51■□□□□ 0.39
GAFA1Q96PS6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.51■□□□□ 0.39
GAFA1Q96PS6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GAFA1Q96PS6 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.51■□□□□ 0.39
GAFA1Q96PS6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.51■□□□□ 0.39
GAFA1Q96PS6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GAFA1Q96PS6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
GAFA1Q96PS6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GAFA1Q96PS6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GAFA1Q96PS6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GAFA1Q96PS6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAFA1Q96PS6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.5■□□□□ 0.39
GAFA1Q96PS6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GAFA1Q96PS6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GAFA1Q96PS6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAFA1Q96PS6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GAFA1Q96PS6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.5■□□□□ 0.39
GAFA1Q96PS6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.5■□□□□ 0.39
GAFA1Q96PS6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.5■□□□□ 0.39
GAFA1Q96PS6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GAFA1Q96PS6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAFA1Q96PS6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
GAFA1Q96PS6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.5■□□□□ 0.39
GAFA1Q96PS6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAFA1Q96PS6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAFA1Q96PS6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAFA1Q96PS6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
GAFA1Q96PS6 AC026310.3-201ENST00000625186 2373 ntBASIC17.5■□□□□ 0.39
GAFA1Q96PS6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.49■□□□□ 0.39
GAFA1Q96PS6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GAFA1Q96PS6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GAFA1Q96PS6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GAFA1Q96PS6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GAFA1Q96PS6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.49■□□□□ 0.39
GAFA1Q96PS6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.49■□□□□ 0.39
GAFA1Q96PS6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GAFA1Q96PS6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GAFA1Q96PS6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.49■□□□□ 0.39
GAFA1Q96PS6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.49■□□□□ 0.39
GAFA1Q96PS6 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.49■□□□□ 0.39
GAFA1Q96PS6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.49■□□□□ 0.39
GAFA1Q96PS6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.49■□□□□ 0.39
GAFA1Q96PS6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GAFA1Q96PS6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GAFA1Q96PS6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.49■□□□□ 0.39
GAFA1Q96PS6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GAFA1Q96PS6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.48■□□□□ 0.39
GAFA1Q96PS6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAFA1Q96PS6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAFA1Q96PS6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAFA1Q96PS6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAFA1Q96PS6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAFA1Q96PS6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAFA1Q96PS6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GAFA1Q96PS6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.48■□□□□ 0.39
GAFA1Q96PS6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
GAFA1Q96PS6 KRT18P20-201ENST00000548986 1279 ntBASIC17.48■□□□□ 0.39
GAFA1Q96PS6 SLC7A5P2-201ENST00000553010 536 ntBASIC17.48■□□□□ 0.39
GAFA1Q96PS6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAFA1Q96PS6 AC120498.10-201ENST00000621827 505 ntBASIC17.48■□□□□ 0.39
GAFA1Q96PS6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAFA1Q96PS6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GAFA1Q96PS6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.48■□□□□ 0.39
GAFA1Q96PS6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms