Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL21A1Q96P44 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL21A1Q96P44 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.82■□□□□ 0.76
COL21A1Q96P44 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
COL21A1Q96P44 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COL21A1Q96P44 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL21A1Q96P44 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL21A1Q96P44 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.81■□□□□ 0.76
COL21A1Q96P44 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.81■□□□□ 0.76
COL21A1Q96P44 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL21A1Q96P44 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL21A1Q96P44 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.81■□□□□ 0.76
COL21A1Q96P44 AC027612.3-201ENST00000413684 1047 ntBASIC19.81■□□□□ 0.76
COL21A1Q96P44 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
COL21A1Q96P44 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.81■□□□□ 0.76
COL21A1Q96P44 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.81■□□□□ 0.76
COL21A1Q96P44 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.81■□□□□ 0.76
COL21A1Q96P44 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL21A1Q96P44 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COL21A1Q96P44 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL21A1Q96P44 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL21A1Q96P44 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.81■□□□□ 0.76
COL21A1Q96P44 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.81■□□□□ 0.76
COL21A1Q96P44 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.81■□□□□ 0.76
COL21A1Q96P44 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
COL21A1Q96P44 AL121603.2-201ENST00000557373 2117 ntBASIC19.81■□□□□ 0.76
COL21A1Q96P44 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.81■□□□□ 0.76
COL21A1Q96P44 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL21A1Q96P44 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL21A1Q96P44 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
COL21A1Q96P44 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL21A1Q96P44 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
COL21A1Q96P44 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
COL21A1Q96P44 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.8■□□□□ 0.76
COL21A1Q96P44 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL21A1Q96P44 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.8■□□□□ 0.76
COL21A1Q96P44 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL21A1Q96P44 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL21A1Q96P44 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.8■□□□□ 0.76
COL21A1Q96P44 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL21A1Q96P44 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL21A1Q96P44 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL21A1Q96P44 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL21A1Q96P44 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL21A1Q96P44 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL21A1Q96P44 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL21A1Q96P44 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL21A1Q96P44 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL21A1Q96P44 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL21A1Q96P44 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL21A1Q96P44 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL21A1Q96P44 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL21A1Q96P44 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL21A1Q96P44 AC009237.3-201ENST00000393279 1427 ntBASIC19.78■□□□□ 0.76
COL21A1Q96P44 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL21A1Q96P44 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
COL21A1Q96P44 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL21A1Q96P44 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL21A1Q96P44 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.78■□□□□ 0.76
COL21A1Q96P44 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.78■□□□□ 0.76
COL21A1Q96P44 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.78■□□□□ 0.76
COL21A1Q96P44 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL21A1Q96P44 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL21A1Q96P44 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL21A1Q96P44 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.77■□□□□ 0.76
COL21A1Q96P44 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL21A1Q96P44 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL21A1Q96P44 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL21A1Q96P44 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL21A1Q96P44 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL21A1Q96P44 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
COL21A1Q96P44 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL21A1Q96P44 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.77■□□□□ 0.76
COL21A1Q96P44 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.77■□□□□ 0.76
COL21A1Q96P44 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL21A1Q96P44 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.77■□□□□ 0.76
COL21A1Q96P44 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
COL21A1Q96P44 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL21A1Q96P44 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL21A1Q96P44 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL21A1Q96P44 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
COL21A1Q96P44 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.76■□□□□ 0.75
COL21A1Q96P44 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL21A1Q96P44 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.76■□□□□ 0.75
COL21A1Q96P44 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.76■□□□□ 0.75
COL21A1Q96P44 YBX1P1-201ENST00000445822 960 ntBASIC19.76■□□□□ 0.75
COL21A1Q96P44 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.76■□□□□ 0.75
COL21A1Q96P44 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.76■□□□□ 0.75
COL21A1Q96P44 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL21A1Q96P44 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.76■□□□□ 0.75
COL21A1Q96P44 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL21A1Q96P44 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.76■□□□□ 0.75
COL21A1Q96P44 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
COL21A1Q96P44 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.75■□□□□ 0.75
COL21A1Q96P44 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL21A1Q96P44 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL21A1Q96P44 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL21A1Q96P44 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
COL21A1Q96P44 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL21A1Q96P44 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms