Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.19■■□□□ 1.14
CALR3Q96L12 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CALR3Q96L12 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CALR3Q96L12 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CALR3Q96L12 AC006128.1-201ENST00000624704 1661 ntBASIC22.19■■□□□ 1.14
CALR3Q96L12 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CALR3Q96L12 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CALR3Q96L12 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.19■■□□□ 1.14
CALR3Q96L12 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CALR3Q96L12 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
CALR3Q96L12 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CALR3Q96L12 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.18■■□□□ 1.14
CALR3Q96L12 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CALR3Q96L12 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
CALR3Q96L12 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.18■■□□□ 1.14
CALR3Q96L12 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CALR3Q96L12 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CALR3Q96L12 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
CALR3Q96L12 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CALR3Q96L12 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CALR3Q96L12 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CALR3Q96L12 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CALR3Q96L12 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CALR3Q96L12 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.18■■□□□ 1.14
CALR3Q96L12 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CALR3Q96L12 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CALR3Q96L12 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.18■■□□□ 1.14
CALR3Q96L12 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CALR3Q96L12 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CALR3Q96L12 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.17■■□□□ 1.14
CALR3Q96L12 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CALR3Q96L12 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CALR3Q96L12 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CALR3Q96L12 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
CALR3Q96L12 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CALR3Q96L12 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CALR3Q96L12 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CALR3Q96L12 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CALR3Q96L12 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CALR3Q96L12 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CALR3Q96L12 MIR4767-201ENST00000582827 78 ntBASIC22.17■■□□□ 1.14
CALR3Q96L12 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.17■■□□□ 1.14
CALR3Q96L12 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.17■■□□□ 1.14
CALR3Q96L12 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CALR3Q96L12 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CALR3Q96L12 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CALR3Q96L12 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CALR3Q96L12 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.16■■□□□ 1.14
CALR3Q96L12 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CALR3Q96L12 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CALR3Q96L12 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CALR3Q96L12 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CALR3Q96L12 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CALR3Q96L12 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CALR3Q96L12 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CALR3Q96L12 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CALR3Q96L12 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CALR3Q96L12 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CALR3Q96L12 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.16■■□□□ 1.14
CALR3Q96L12 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CALR3Q96L12 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.16■■□□□ 1.14
CALR3Q96L12 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.16■■□□□ 1.14
CALR3Q96L12 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CALR3Q96L12 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CALR3Q96L12 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CALR3Q96L12 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CALR3Q96L12 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CALR3Q96L12 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CALR3Q96L12 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CALR3Q96L12 AC055733.4-201ENST00000638462 1354 ntBASIC22.15■■□□□ 1.14
CALR3Q96L12 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CALR3Q96L12 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CALR3Q96L12 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CALR3Q96L12 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CALR3Q96L12 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CALR3Q96L12 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.15■■□□□ 1.14
CALR3Q96L12 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CALR3Q96L12 AL136116.3-201ENST00000402907 1138 ntBASIC22.15■■□□□ 1.14
CALR3Q96L12 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.15■■□□□ 1.14
CALR3Q96L12 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.15■■□□□ 1.14
CALR3Q96L12 AC126544.1-201ENST00000580842 1059 ntBASIC22.15■■□□□ 1.14
CALR3Q96L12 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.15■■□□□ 1.14
CALR3Q96L12 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CALR3Q96L12 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.15■■□□□ 1.14
CALR3Q96L12 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CALR3Q96L12 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.15■■□□□ 1.14
CALR3Q96L12 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CALR3Q96L12 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CALR3Q96L12 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.14■■□□□ 1.14
CALR3Q96L12 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CALR3Q96L12 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.14■■□□□ 1.14
CALR3Q96L12 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CALR3Q96L12 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CALR3Q96L12 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CALR3Q96L12 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CALR3Q96L12 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CALR3Q96L12 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.14■■□□□ 1.13
CALR3Q96L12 UNC93B3-201ENST00000308076 687 ntBASIC22.14■■□□□ 1.13
CALR3Q96L12 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CALR3Q96L12 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms