Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.87■□□□□ 0.61
PTP4A1Q93096 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.87■□□□□ 0.61
PTP4A1Q93096 SMUG1P1-201ENST00000590640 811 ntBASIC18.87■□□□□ 0.61
PTP4A1Q93096 AL139246.5-201ENST00000606645 996 ntBASIC18.87■□□□□ 0.61
PTP4A1Q93096 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.87■□□□□ 0.61
PTP4A1Q93096 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PTP4A1Q93096 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTP4A1Q93096 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PTP4A1Q93096 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTP4A1Q93096 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTP4A1Q93096 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
PTP4A1Q93096 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTP4A1Q93096 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTP4A1Q93096 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTP4A1Q93096 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.86■□□□□ 0.61
PTP4A1Q93096 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTP4A1Q93096 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTP4A1Q93096 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.86■□□□□ 0.61
PTP4A1Q93096 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.86■□□□□ 0.61
PTP4A1Q93096 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.86■□□□□ 0.61
PTP4A1Q93096 AC133561.4-201ENST00000566112 224 ntBASIC18.86■□□□□ 0.61
PTP4A1Q93096 MIR4767-201ENST00000582827 78 ntBASIC18.86■□□□□ 0.61
PTP4A1Q93096 AC110285.6-201ENST00000617652 491 ntBASIC18.86■□□□□ 0.61
PTP4A1Q93096 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTP4A1Q93096 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTP4A1Q93096 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTP4A1Q93096 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
PTP4A1Q93096 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PTP4A1Q93096 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTP4A1Q93096 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTP4A1Q93096 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTP4A1Q93096 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PTP4A1Q93096 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTP4A1Q93096 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTP4A1Q93096 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.85■□□□□ 0.61
PTP4A1Q93096 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PTP4A1Q93096 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.85■□□□□ 0.61
PTP4A1Q93096 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTP4A1Q93096 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.85■□□□□ 0.61
PTP4A1Q93096 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.85■□□□□ 0.61
PTP4A1Q93096 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PTP4A1Q93096 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PTP4A1Q93096 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTP4A1Q93096 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTP4A1Q93096 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A1Q93096 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PTP4A1Q93096 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A1Q93096 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A1Q93096 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A1Q93096 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A1Q93096 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.84■□□□□ 0.61
PTP4A1Q93096 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PTP4A1Q93096 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.84■□□□□ 0.61
PTP4A1Q93096 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.84■□□□□ 0.61
PTP4A1Q93096 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A1Q93096 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A1Q93096 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PTP4A1Q93096 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PTP4A1Q93096 PLK5-205ENST00000642079 1969 ntBASIC18.84■□□□□ 0.61
PTP4A1Q93096 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A1Q93096 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A1Q93096 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.83■□□□□ 0.61
PTP4A1Q93096 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTP4A1Q93096 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTP4A1Q93096 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTP4A1Q93096 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.83■□□□□ 0.61
PTP4A1Q93096 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTP4A1Q93096 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTP4A1Q93096 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTP4A1Q93096 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTP4A1Q93096 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTP4A1Q93096 EDA-201ENST00000338901 1233 ntBASIC18.83■□□□□ 0.6
PTP4A1Q93096 BX842568.3-201ENST00000418104 571 ntBASIC18.83■□□□□ 0.6
PTP4A1Q93096 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTP4A1Q93096 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTP4A1Q93096 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.83■□□□□ 0.6
PTP4A1Q93096 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTP4A1Q93096 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTP4A1Q93096 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTP4A1Q93096 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
PTP4A1Q93096 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
PTP4A1Q93096 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.83■□□□□ 0.6
PTP4A1Q93096 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A1Q93096 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A1Q93096 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A1Q93096 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.82■□□□□ 0.6
PTP4A1Q93096 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A1Q93096 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.82■□□□□ 0.6
PTP4A1Q93096 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.82■□□□□ 0.6
PTP4A1Q93096 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A1Q93096 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A1Q93096 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.82■□□□□ 0.6
PTP4A1Q93096 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PTP4A1Q93096 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.82■□□□□ 0.6
PTP4A1Q93096 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.82■□□□□ 0.6
PTP4A1Q93096 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.82■□□□□ 0.6
PTP4A1Q93096 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
PTP4A1Q93096 AC233992.3-201ENST00000607491 485 ntBASIC18.82■□□□□ 0.6
PTP4A1Q93096 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A1Q93096 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms